Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0096 ATGAAGATTCATAAGAGGATTACATGGAGGTCCATCATGTTGATGTTCAGTTGCTCCAAGACTAAATGCCCACTGAAGGAATCCAAAAAGAAGATTTCCAAGCAAGGTTCTTTCCGGAGACTAGGCCTCTCTGATATCAGCATTTCAAGCTCTGGTCAGGCCATTGACGATCTTTCTATCTCCCTCGTTGGTCCAAAGCTTTATCCATTTACCCTTGAAGAGCTGAGAGAAGCAACGCATAATTTCTCTTGGAGTAATCTAATAGGTGAAGGTGGGTTTGGACCTGTGTATAAGGGCTTTGTTGATGACAAGCTAAGACCTGGTTTGAAAGCTCAGCCTGTGGCTGTGAAACGACTAAACTTGGACGGCATGCAAGGTCATAGGGAGTGGCTGGCAGAGATAATCTTTCTAGGACAGCTAAAGCATCCAAATCTTGTGAACTTAATTGGGTACTGTTATGAGGAGGAACACAGGCTATTAGTGTATGAATACATCGCAAGAGGCAGCTTGGAGAGTCAACTTTTTAGAAGATACACTGCAGCCTTGCCATGGTCAACCAGGATAAAAATTGCCCTGGGAGCAGCCAAGGGCCTAGCCTTTCTTCATGAAGCAGACAAACCAGTGATATATAGGGACTTCAAAACTTCAAATATCTTATTAGACGCGGATTATTCGGCTAAGCTCTCAGACTTCGGGTTTGCAAAAGATGGACCTGAAGGGGAAGACACACATGTAACAACACGAGTAATAGGAACACATGGCTATGCAGCACCAGAGTACATCATGACAGGTCACCTTACAACAAAGAGCGACGTGTATAGCTATGGAGTGGTGTTATTAGAACTAATAACAGGAAGAAGGATAGTGGATAAGAGCAGGCCAGATAGAGAGCAGAGCCTTGTGGAATGGGCAAGGCCTCTGTTGAGGGATCAGAAAAAGCTTCACCGCTTCATAGACCCTCGGTTGGAAGGAAGATTTTCTATCAAAGGAGCTCATAAAGTCGCTGCCTTGGCTTACAAGTGCTTGAGCCACCACCCTCACCCAAGACCAACCATGAGCGTTGTGGTCAACTTATTGGAGCCACTCCAGCACTTTGATGATGCATTGCTGGAACCCTTTGTGTATGTAGCAGTCAATCAAGGTGGCAACATCGACTAA 1158 0.4516 MKIHKRITWRSIMLMFSCSKTKCPLKESKKKISKQGSFRRLGLSDISISSSGQAIDDLSISLVGPKLYPFTLEELREATHNFSWSNLIGEGGFGPVYKGFVDDKLRPGLKAQPVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVNLIGYCYEEEHRLLVYEYIARGSLESQLFRRYTAALPWSTRIKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDADYSAKLSDFGFAKDGPEGEDTHVTTRVIGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGRRIVDKSRPDREQSLVEWARPLLRDQKKLHRFIDPRLEGRFSIKGAHKVAALAYKCLSHHPHPRPTMSVVVNLLEPLQHFDDALLEPFVYVAVNQGGNID 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0096 385 Gene3D Phosphorylase Kinase; domain 1 46 164 - -
Prci8g0096 385 ProSiteProfiles Protein kinase domain profile. 82 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0096 385 Pfam Protein kinase domain 86 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0096 385 CDD STKc_IRAK 88 362 - -
Prci8g0096 385 FunFam Serine/threonine-protein kinase PBS1 165 370 - -
Prci8g0096 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Prci8g0096 385 FunFam Serine/threonine-protein kinase BIK1 49 164 - -
Prci8g0096 385 PANTHER OS01G0588500 PROTEIN-RELATED 38 363 - -
Prci8g0096 385 Gene3D Transferase(Phosphotransferase) domain 1 165 370 - -
Prci8g0096 385 SUPERFAMILY Protein kinase-like (PK-like) 59 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0096 Prci-Chr8 631790 633898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0096 70 359 Glycoside Hydrolase AT3G07070 53.584 2.92e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci8g0096 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0096 - - gmx:100802636 597.43