Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0087 ATGGGCGGCGGTAGAGTTGAGGTTGTAAGTAGCAAGGGATGCTCTGGACTGTTTTCACCTTCGTTGCCTTTAGTCAGGGGTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCTGAACCCATGGAAGGGCGATCAAGTGCTCCTTTTGCTGGGCTCGTTATATGCGTAACTGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCAACGGAGAGATTAGGTGGCCAATATAGTCCCCATTTGCATCCTCAATGCACCCATTTGGTGGTTCAGAGCTTTGCTGGGCGTAAGTTTGAGCATGCACTGAAGCATGGTGCAAGAAATGGTCTTTTTATTGTCACACTGGGTTGGTTTGTTGATAGTGTTAGAAAAAATGTGAGGTTGATTGAATCACTTTATAGTGTGAACAATTTTGGCAATAACAATACGAATTGGGATGATTATAAACTGCTCTCTGGGCATACAAATGAAAATTCTTGTCTTCCTGTAAGTCTCCACGAAACCAAGCAAAATGACAGAGTTGAAGAATTTCAAAGATTTTCTGGGTGTGAGTCTGGAAAGAATGTGGATTTGCTCTTATCCGGTTGCTCTATTTATGTTGATCCAGGCATCTCACCTGAATTGCGGAATAAGGTTGTCGAGACTGCTTCCAGAGAAGGTGCCAGTTTGATGGAACGGTGGTTTGTTGGTTGTAATGCTAGTCATGTAGTCACTGAAGGGACATCGATTCAAAGATATCTTGGATATTCTAGCAACTTCATTACACCACTGTGGATTCTAAAAACAGCTAAGGAGAAACAAGTACAAAGGCTTGTTCACATGTCTGCTGATTTGGCAAGGCAAGTGGGTTTGATGCTTGAGGACATTCATACTGGCACTACAAGGGAGGAATCACTTAAGCACGATCTCCCTGAAGATATTCAGGCCGTTAAAAGTAAAGGAAGTTACAGAGAAAGACAACAAATTGTGAACTCTGCAAAAATAGGTGTCAGAAATCGCCGTGGTCGTCAAATGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCTAACAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAGCCAACTTCAACAGCCTCCATTTACACCGACTCTCTTAGTGAAGATCCTAATGAAACTCATTTTTCAACCTTTTGTGATTCCAAAGGGGCCGTCAAAGATTCAGAAGCTTCATTTTCAAACTCCACTCGACCTCTAACAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCACTTTCTTACCATTCTCTTTCCGATTGATCGATTCACTGAGATGGGTCCTTCGTCAAGAACATTTTTCAGCCACAACGGCTTTACATGCCTACAGGTGTTGGATCGTATCTATGCATTTTATCAGGAGAATCTGTCAGCCCATGAAATAGAAGCTGCAATTCATACTGATTCAAGACATGCTGATGGGCTTCGATCAGTGTACTCCAGTAAAGAAACAGCAGAACGTGGGTTTTTGATGTTCAAAAGGATTGATTTCTTGGGTAGTCGTACAAGTTTTGAAATGTTGAAACGTGTGGCTGGGGACAACAACTCTAATGTCTACGAACTATTGCTCAGGGCCTAA 1629 0.4236 MGGGRVEVVSSKGCSGLFSPSLPLVRGLHLQPLEPMTPVSSFHGSEPMEGRSSAPFAGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVVQSFAGRKFEHALKHGARNGLFIVTLGWFVDSVRKNVRLIESLYSVNNFGNNNTNWDDYKLLSGHTNENSCLPVSLHETKQNDRVEEFQRFSGCESGKNVDLLLSGCSIYVDPGISPELRNKVVETASREGASLMERWFVGCNASHVVTEGTSIQRYLGYSSNFITPLWILKTAKEKQVQRLVHMSADLARQVGLMLEDIHTGTTREESLKHDLPEDIQAVKSKGSYRERQQIVNSAKIGVRNRRGRQMQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSLSEDPNETHFSTFCDSKGAVKDSEASFSNSTRPLTESEKSELIFKNHFLTILFPIDRFTEMGPSSRTFFSHNGFTCLQVLDRIYAFYQENLSAHEIEAAIHTDSRHADGLRSVYSSKETAERGFLMFKRIDFLGSRTSFEMLKRVAGDNNSNVYELLLRA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0087 542 Pfam twin BRCT domain 59 113 IPR001357 -
Prci8g0087 542 SUPERFAMILY BRCT domain 53 144 IPR036420 -
Prci8g0087 542 CDD BRCT_TopBP1_rpt2_like 55 133 - -
Prci8g0087 542 ProSiteProfiles BRCT domain profile. 196 276 IPR001357 -
Prci8g0087 542 ProSiteProfiles BRCT domain profile. 51 143 IPR001357 -
Prci8g0087 542 Gene3D BRCT domain 54 145 IPR036420 -
Prci8g0087 542 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 542 - -
Prci8g0087 542 SMART BRCT_7 53 133 IPR001357 -
Prci8g0087 542 SMART BRCT_7 198 274 IPR001357 -
Prci8g0087 542 Pfam Family of unknown function (DUF6699) 366 526 IPR046522 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0087 Prci-Chr8 586148 594277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0087 43 143 Core DNA Replication Machinery Family AT1G77320 38.614 3.84e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0087 - - pcin:129318227 1087.79