Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0085 ATGGTGAAGCCATTAATGGCGTCCGCTAATGCTGCAACCATGAGCGATCAGTGTTTCAGGTACAAAGGAGTGAGAAAGCGAAAATGGGGGAAATGGGTATCTGAAATCAGACTTCCCAACAGCCGACAACGCATTTGGCTGGGATCTTACGATTCTGCAGAGAAGGCTGCTCGGGCCTTCGATGCTGCACTCTTATGTCTTCGTGGTGGTCGTGCCAATTTCAACTTCCCTGACACTCCTTTCCTCTTTCATCTTCCTGATGATCACCGATCTCTCACCCCTCACCAGATTCAGCTTCTTGCTTCTTCCTTCGCCAAACAGCTGCCCCACGAGTCGCCGGCGGAGCCACCCCATGAAGAACCTTTGTCTGCAGAATTTCAGTCGAGTCCTGTATCGGTGTCGGGGACAGGTTCTAGTACCTGTACTTCTTCGTCTAGTTCCTGTACGCAAGTAGAAGTGGACCATGGTGATGCCAGGACCATAGATTGGTCGTTTTTGAATTCGCTGGACTCTAATGGCCTTGGTGCCACCGACGACTGTGGACTCTATTCTGAGTTGGATTACTTCCAGCTTGGTGAGTCGTCCGATTTATATCTCATGCCCCCAGCCGTGCCTTTCGACTACAATGCCCAGGAAAATCAATACGAGGATGCTTATTCTCACCATTCATTCCTTTGGAACTTCGGATACGAGTGTTCGTAG 702 0.5 MVKPLMASANAATMSDQCFRYKGVRKRKWGKWVSEIRLPNSRQRIWLGSYDSAEKAARAFDAALLCLRGGRANFNFPDTPFLFHLPDDHRSLTPHQIQLLASSFAKQLPHESPAEPPHEEPLSAEFQSSPVSVSGTGSSTCTSSSSSCTQVEVDHGDARTIDWSFLNSLDSNGLGATDDCGLYSELDYFQLGESSDLYLMPPAVPFDYNAQENQYEDAYSHHSFLWNFGYECS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0085 233 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Prci8g0085 233 MobiDBLite consensus disorder prediction 125 143 - -
Prci8g0085 233 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 FunFam Ethylene-responsive transcription factor 2 20 78 - -
Prci8g0085 233 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Prci8g0085 233 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 157 - -
Prci8g0085 233 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Prci8g0085 233 MobiDBLite consensus disorder prediction 108 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0085 Prci-Chr8 574339 575312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0085 1 189 AP2-EREBP Transcription Factor Family AT1G74930 44.503 2.25e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci8g0085 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0085 - - pcin:129318518 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0085 8 574339 575312 Prci8g0085 8 574339 575312 ECH