Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0076 ATGGAATCGGAGGATTCGGTGAAACATCAATTGGAGGAATTGCAGAAACATTTGGGGAAGAAGCAAAAGTTCGAGGAAGCTGTCTCCTCTCTTAAATCCCTCCTTCAACAAAAGTATCAATTGGCTTCTCCCTCCCTTCGCAAAACCTTTTATACGGCTATATGCCGAGTTGCTACTGTATTGAAGACCAGATATACCGCGCCCGGTTTCTGGAATGCTGGGCTGGGGCTTTTTGAGCAGGCTGAATTGCTTGTTTCTGATCCATATGAGAAGGAACACTTGAAGGGTTGCGTCTCTCAGGCGAGGGAAGAGTTGCATCTAGAGGATAATCCGACACAGGTTTCACAGCCCGCTCAAAATTCTGCCAATGGAGGGTATCTTTTTGAGGGACGTCTTACCGTAGATCCTGAGCCACCTCAGCCTCAATGGTTGGTGCAGTCAAACCTCTTGACAACAGCTGCTACGCTATTTGCTGCTGAATCATCTCAAGGTTTAGCGGCAGATGATACTTCACGGGAAAATGCTGCAAATATGCTTCAGGATCTTCTAAATAGATTGGAAGATGCCGTGCCACTGATGCTGAGTGATGGTCCAGTACCTCATAAAGTCCCTCCTGCTAGCAAAGAAGTTGTGGCAAAACTTCCGGTCATTGCTCTTACAGAGGAAATCCTGACTAAGCTTGGGAAAGATGCAGAGTGTTCAATTTGCAAGGAAAACTTGGCTCTAAATGACGAAATGCAGGAGCTGCCTTGCAGGCACACGTTCCACCCACCTTGTCTAAAGCCATGGCTGGACGAGCATAATTCATGCCCTATTTGTCGGTATGAGCTGCAAACTGATGACCATGTCTATGAGAGCTGGAAGGAGCGTGAGAAGGAAGCAGAAGAAGAGAGGAAGGGTGCCGAAAATGCCATTCGTGGTGGTGAATATATGTATGTTTAG 942 0.4692 MESEDSVKHQLEELQKHLGKKQKFEEAVSSLKSLLQQKYQLASPSLRKTFYTAICRVATVLKTRYTAPGFWNAGLGLFEQAELLVSDPYEKEHLKGCVSQAREELHLEDNPTQVSQPAQNSANGGYLFEGRLTVDPEPPQPQWLVQSNLLTTAATLFAAESSQGLAADDTSRENAANMLQDLLNRLEDAVPLMLSDGPVPHKVPPASKEVVAKLPVIALTEEILTKLGKDAECSICKENLALNDEMQELPCRHTFHPPCLKPWLDEHNSCPICRYELQTDDHVYESWKEREKEAEEERKGAENAIRGGEYMYV 313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0076 313 Coils Coil 284 304 - -
Prci8g0076 313 FunFam E3 ubiquitin-protein ligase RNF181 195 280 - -
Prci8g0076 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 124 277 - -
Prci8g0076 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Prci8g0076 313 SMART ring_2 233 273 IPR001841 -
Prci8g0076 313 Pfam Ring finger domain 232 274 IPR001841 -
Prci8g0076 313 CDD RING-H2_RNF126-like 232 274 - -
Prci8g0076 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 280 IPR013083 -
Prci8g0076 313 SUPERFAMILY RING/U-box 227 280 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0076 7 313 C3H Transcription Factor Family AT5G20910 63.961 1.71e-128 367
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0076 K16274 - gmx:100800189 498.434