Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0072 ATGGTTTGTGAGATGGAGAATGACTATATCGAGGACATGGACATTGAACTCCTCCATTCAATGTGGCCTGAAGATATTGGAACTGATGTTGGAAAAAAATTTAACATAGAAAAGCCTGGAAAGGACCAAGATATGTTGGAAGAGATTATAATGATGGAGGAGTCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTCACAAATTATACAGACAAGGGGTCTTCTCAACTTTCCTACCTCATGAAACATTTGGAGTATAAGCAGGCCAATGCTGTGCGTCTTCTTAGAGAAGAATTTGACAACCTAAGCAAACAGAGGCGGGAGGTTGAGCTAAGGAAGTTGGAGATATTGGAGGAGCATCGATTTGAGGAAGAAGCATATGGGGACAAACGCCCAGTTTCTATTTTGGATGAAATATATGATATATGGCAAGATGTACCACGCAGGAAATGCGATGTCGTTGTTCAAAACAACAGAATTGAAATAGATGCTGAGTATGATACAACCGTATATTGGAAACAGCGAGCGCTGCATTTGGAAAAAATGTTGGAGGCGAGTGTTCAAAGAGAGCAGATACTTGCAGAAAAGTTACAAGAAAGTATAAAGAATCTTGAAAAGCAGTCCTTACCCGTAGAAGAACTGTCCCAGATTCTGAAAAGGGCAGATAATTTCTTACATTTTGTACTACAGAATGCACCTGTGGTTATTGGTCACCAGGACAAAGAGTTGCGATATCGATTTATCTATAATCATTTTCCAAGTTTGCACGAGGAGGACATCATTGGAAAAACAGATGTTGAAATTTTCACAGGATCTGGTGTTAAAGAATCTCAAGATTTTAAGAGAGAAGTTCTAGAAAAAGGCTTGCCTGCGAAAAGGGAAATCACTTTTGAGACAGAATTATTTGGGTCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGACGGGGGAGACGCTAGGAATAAACTATATGGGAATGGATGTCACAGATCAGGTGAGAAAAAGAGAGAGGATGATGAAGATCCGGGAAGAAATTGCGGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACTATCCACATTACAGAGGAGACTATGAGAGCAAAACAAATGTTGGCAACCATGTCTCATGAGATCAGATCCCCATTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCAAGGACAAAGCTTGATCGTGAGCAAAGACAACTCTTGGATGTCATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTGGAGGCTACCAAGTTCCGGCCAAGAGAGGTAGTAAAGCATGTACTCCAGACTGCTGCAGCTTCACTTCAGAAAATATTAACCTTGGAAGGACATGTAGCAGATGATGTACCCACCGAGGTCATCGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATTTAGTCAGCAATGCAATCAAGTTTACTCATGAAGGCAAAGTTGGTATCAATCTTTACCTTGTGCCAGATCCGTCTTTTGCAAAAGCAGAAGCAAGCCTCAAGAAGACTAGTGCAGACCAGTCTAGTATTTCAGGGAATGGAGTCGAAGAGGAATATCTCTCAGCATCTCAAAATAGCAGTAGCCAAAATCATGCATTGAGTGATGAAGATAGCCCTCTGGTTAAAAGCGAGTGCTTAATGAATGGAGGTACTGGGGAGCAACCTCACTCAACTGAAACAGCAGTGTGGATGCGTTGTGATGTCTATGACACAGGAATTGGAATACCAGAGAAGGCTATACCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCATGCCAGAAAGTATGGTGGGACAGGTTTGGGACTAGCAATATGCAAACAACTGGTTGAGTTAATGGGTGGACGTCTTACTGTGACTAGCAAAGAACACTGTGGCTCTACATTTACCTTCATATTGCCATACAAGGTTTCAGCTATTTGTGATCATTCTGATGAGCCCTCAGATGCAGAGGATGATGATGATGCATCTGATGATACCACAGAGAGCTTCTTCCAATTTCAACCACCCACTTTGGGCTCCCTGTTCTCCTCCTATGGATCTAGCAGGACCCAAAAGTTATTACCTCAAAAAATTGGGTGTGTAACCTCGCGTAAACTCAATGGGTTTCCCGAGATTTCCTATTCAATTCCCTCTAATAATATCCAATTGGAAGGAGCAAATTCAGTTGAGGATGCATCCTCAGTAGCTGATGACCTGGCGATATCCGAATGTGCATGTTCATCGAGTCACAGCCCAGAGATAGAGAACAAAAATGCAGATACAAGAAACGAATCGCAAAATGGCCGTGGAGATTCTCCATATCATGCAGAGGTAGATCAAGATCGGATAGCCACAACAACAATGTTGAGGGAACAAGAAGCAAGTTCGAGTCAAGAAAGAACAGGGATTGCCTCGCAATGTGTCTCTAGCAGCAGTACTTCAGAAGTAGCTAAACCAAATTTAAAGCCTAATATCCTTCTCGTTGAGGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAAGCAATTAGGTCATAGCATAGATGTTGTGAATAATGGAGTGGAAGCTGTGCGTGCTGTTCAGCGCCAGAGCTATGACCTAATTCTTATGGATGTGTGCATGCCAGTTATGAATGGTCTGCAAGCAACAAAACTGATTCGTTCTTTTGAAGAAACGGGTAGCTGGGATGCTGCAATAGAAGCTGGAATTGAACTAAATCTACCGGCTTCACATTTGCATGAGAATGAATTCTCTCTACCTCCCACCAAGTCAAACCACATCCCTATTATTGCGATGACAGCAAATGCTTTGTCCGAGAGTGCTGACGAGTGTTTTGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAGAGTGTCTTGAACAGTACTTAAAGTGA 2985 0.4157 MVCEMENDYIEDMDIELLHSMWPEDIGTDVGKKFNIEKPGKDQDMLEEIIMMEESTIVDFKRLMELTNYTDKGSSQLSYLMKHLEYKQANAVRLLREEFDNLSKQRREVELRKLEILEEHRFEEEAYGDKRPVSILDEIYDIWQDVPRRKCDVVVQNNRIEIDAEYDTTVYWKQRALHLEKMLEASVQREQILAEKLQESIKNLEKQSLPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVRKRERMMKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSRTKLDREQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPTEVIGDVLRIRQILTNLVSNAIKFTHEGKVGINLYLVPDPSFAKAEASLKKTSADQSSISGNGVEEEYLSASQNSSSQNHALSDEDSPLVKSECLMNGGTGEQPHSTETAVWMRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHCGSTFTFILPYKVSAICDHSDEPSDAEDDDDASDDTTESFFQFQPPTLGSLFSSYGSSRTQKLLPQKIGCVTSRKLNGFPEISYSIPSNNIQLEGANSVEDASSVADDLAISECACSSSHSPEIENKNADTRNESQNGRGDSPYHAEVDQDRIATTTMLREQEASSSQERTGIASQCVSSSSTSEVAKPNLKPNILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVQRQSYDLILMDVCMPVMNGLQATKLIRSFEETGSWDAAIEAGIELNLPASHLHENEFSLPPTKSNHIPIIAMTANALSESADECFANGMDSFVSKPVTFQKLKECLEQYLK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0072 994 Pfam His Kinase A (phospho-acceptor) domain 372 435 IPR003661 GO:0000155|GO:0007165
Prci8g0072 994 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 10 993 - -
Prci8g0072 994 MobiDBLite consensus disorder prediction 671 696 - -
Prci8g0072 994 Gene3D PAS domain 211 346 - -
Prci8g0072 994 SUPERFAMILY CheY-like 844 994 IPR011006 -
Prci8g0072 994 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 662 IPR036890 -
Prci8g0072 994 SMART HKATPase_4 481 664 IPR003594 -
Prci8g0072 994 ProSiteProfiles Response regulatory domain profile. 845 993 IPR001789 GO:0000160
Prci8g0072 994 MobiDBLite consensus disorder prediction 542 561 - -
Prci8g0072 994 FunFam Histidine kinase 5 212 347 - -
Prci8g0072 994 CDD REC_hyHK_CKI1_RcsC-like 846 989 - -
Prci8g0072 994 MobiDBLite consensus disorder prediction 768 799 - -
Prci8g0072 994 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Prci8g0072 994 Gene3D - 838 994 - -
Prci8g0072 994 Pfam Response regulator receiver domain 846 913 IPR001789 GO:0000160
Prci8g0072 994 MobiDBLite consensus disorder prediction 542 562 - -
Prci8g0072 994 MobiDBLite consensus disorder prediction 673 687 - -
Prci8g0072 994 Gene3D - 358 435 - -
Prci8g0072 994 MobiDBLite consensus disorder prediction 811 836 - -
Prci8g0072 994 CDD HATPase_EvgS-ArcB-TorS-like 486 661 - -
Prci8g0072 994 Coils Coil 92 112 - -
Prci8g0072 994 CDD HisKA 372 431 IPR003661 GO:0000155|GO:0007165
Prci8g0072 994 Coils Coil 187 207 - -
Prci8g0072 994 PRINTS Bacterial sensor protein C-terminal signature 589 603 IPR004358 GO:0016310|GO:0016772
Prci8g0072 994 PRINTS Bacterial sensor protein C-terminal signature 624 642 IPR004358 GO:0016310|GO:0016772
Prci8g0072 994 PRINTS Bacterial sensor protein C-terminal signature 648 661 IPR004358 GO:0016310|GO:0016772
Prci8g0072 994 ProSiteProfiles Histidine kinase domain profile. 377 664 IPR005467 -
Prci8g0072 994 FunFam Putative histidine kinase 5 358 435 - -
Prci8g0072 994 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 662 IPR003594 -
Prci8g0072 994 FunFam Histidine kinase 5 838 994 - -
Prci8g0072 994 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 369 435 IPR036097 GO:0000155|GO:0007165
Prci8g0072 994 SMART REC_2 844 989 IPR001789 GO:0000160
Prci8g0072 994 Gene3D - 436 667 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0072 Prci-Chr8 442469 448759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0072 1 993 Histidine Kinase Gene Family AT5G10720 58.466 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g0072 HATPase_c 3.5e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0072 - - gmx:100801640 1401.73