Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0069 ATGGCTTCCAAGCTCTGTGACTCCTGCAAGTCCGCCACCGCCACCCTCTTCTGCCGCGCCGACTCCGCCTTCCTCTGCCTCGGCTGTGACTCCAAGGTCCATGCCGCCAACAAGCTTGCTTCCCGCCACGCGCGCGTCTGGGTTTGCGAGGTCTGCGAGCAGGCTCCTGCTCACGTCACCTGCAAGGCCGACGCTGCTGCTCTCTGCATCACCTGTGACCGGGATATCCACTCTGCCAATCCACTCGCTCGCCGTCACGAGCGTGCCCCCGTCACTCCCTTCTATGATCCCGTCCACTCAGTCGGTGTCCCGTCGGGCGCTGCCATCAACTTCCTCAACGACCGTTACTTCTCCGATGCCGATGCAGATGCTGATGTCAGCAGGGAAGAGGCGGAAGCGGCTTCCTGGTTGCTGCCAAACCCTTCCAATCCGAAGGCCGTAGAGAGCCCAGATCTGAACTCCGGTGAGTACGTGTTTCCCGAAATGGAGCCCTGCCTGGATCTGGATTTCGGGCCGGAGGATCCGAAGGAGGAGGCTCAGGAGCAGAACAGTTCCGGCACTGATGGTGTTGTGCCGGTACAGAGCAAGAGCGCACAGATTCCATCCCTCAACGACCACTACTACGACATGGAATTGACTGGGTCCAAGAATTTCGCCTACGGTTACAACGGCAGCCAGTGTCTGAGCCAGAGTGTATCGTCTTCTTCCATGGAAGTCGGGGTGGTTCCAGATGGGAATGCGATATCGAACGGCTACAGCAAGACGATGATGGGGAGCGAGAATCAGACGGTGCAGATATCAGCCGCTGACAGGGAAGCGAGGGTATTGAGGTACAGAGAGAAGAGGAAGAACCGCAAGTTCGAGAAGACTATTCGATACGCTTCCAGAAAAGCGTATGCGGAAACGAGACCCAGGATCAAAGGCAGATTCGCCAAGCGATCGGAGGCGGACCGCTTCGGAGGATACGGCGTCGTACCAAGCTGTTGA 987 0.5826 MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCITCDRDIHSANPLARRHERAPVTPFYDPVHSVGVPSGAAINFLNDRYFSDADADADVSREEAEAASWLLPNPSNPKAVESPDLNSGEYVFPEMEPCLDLDFGPEDPKEEAQEQNSSGTDGVVPVQSKSAQIPSLNDHYYDMELTGSKNFAYGYNGSQCLSQSVSSSSMEVGVVPDGNAISNGYSKTMMGSENQTVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEADRFGGYGVVPSC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0069 328 MobiDBLite consensus disorder prediction 168 193 - -
Prci8g0069 328 SMART bboxneu5 1 48 IPR000315 GO:0008270
Prci8g0069 328 SMART bboxneu5 49 91 IPR000315 GO:0008270
Prci8g0069 328 CDD Bbox1_BBX-like 5 48 - -
Prci8g0069 328 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 315 IPR045281 GO:0009909
Prci8g0069 328 Pfam B-box zinc finger 46 90 IPR000315 GO:0008270
Prci8g0069 328 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Prci8g0069 328 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Prci8g0069 328 ProSiteProfiles CCT domain profile. 271 313 IPR010402 GO:0005515
Prci8g0069 328 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Prci8g0069 328 Pfam CCT motif 271 313 IPR010402 GO:0005515
Prci8g0069 328 CDD Bbox1_BBX-like 48 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0069 Prci-Chr8 424169 425510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0069 1 327 C2C2-CO-like Transcription Factor Family AT5G24930 60.882 6.69e-138 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Prci8g0069 zf-B_box 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0069 - - pcin:129317838 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0069 8 424169 425510 Prci8g0069 8 424169 425510 ECH