Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0053 ATGGGGGTTTACCTTAGCACTCCTAAAACTGAAAAGTTTTCCGAAGATGGTGAGAATGGCCATCTTAGATATGGTTTATCGTCCATGCAAGGATGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGGCATGGAGGGAAGGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAGCAGGTGCTTACAAGTGAATCATATCAAGCAGGAGATATAGGAACCTCTCTTCAGAAAGCCTTTTTCAGAATGGATGAGATGATGCGTGGCCAAAGAGGATGGAGGGAATTAGCAGTCTTGGGGGATAAGATGAACAAATTTACTGGGATGATAGAAGGGTTGTTTTGGTCTCCCAGAAACAGTGATAATAATGTTCACGTTGATGATTGGGCTTTTGAGGAGGGCCCCCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCATGCGTTGCAGTTATTAGAAACAATCAGTTAGTTGTTGCGAATGCTGGTGATTCACGTTGTGTGATATCTAGAAATGGTCAGGCATACAACTTGTCAAGAGATCACAAACCTGATCTTGAAGCTGAGAAGGATAGAATTTTAAAAGCGGGTGGTTTTATTCACGCGGGACGAGTTAATGGCAGTTTAAATCTGGCCCGAGCTATAGGTGACATGGAATTTAAACAGAATAAATTTCTGCCCGCTGAAAAACAAATTGTGACTGCCAATCCTGATATAAACACTGTTGAGCTTTGTGAAGATGATGAGTTTATGGTGCTAGCATGTGACGGCATATGGGATTGCATGTCAAGCCAGCAGTTGGTAGATTTTGTGCATGAACAACTGCGTTCGGAAACTAAACTCTCTGTGGTGTGTGAAAGAGTTCTTGATCGGTGTTTGGCACCGTCAACTGTGGGCGGCGAGGGATGCGATAACATGACAATGATATTGGTGCAGTTCAAGAAACCCACTCAATTCACAGCAGCAGTAGCAGAAGAGCAATCCTCTGAAGCTGAAGCTAATACGGAGGAGAGAAGCCAGAGTGAATGA 1077 0.4383 MGVYLSTPKTEKFSEDGENGHLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLTSESYQAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKMNKFTGMIEGLFWSPRNSDNNVHVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRNGQAYNLSRDHKPDLEAEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCEDDEFMVLACDGIWDCMSSQQLVDFVHEQLRSETKLSVVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTQFTAAVAEEQSSEAEANTEERSQSE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0053 358 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Prci8g0053 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Prci8g0053 358 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Prci8g0053 358 Pfam Protein phosphatase 2C 135 313 IPR001932 -
Prci8g0053 358 CDD PP2Cc 23 329 IPR001932 -
Prci8g0053 358 SMART PP2C_SIG_2 28 329 IPR001932 -
Prci8g0053 358 PANTHER PROTEIN PHOSPHATASE 2C 19 328 IPR015655 GO:0004722|GO:0006470
Prci8g0053 358 SMART PP2C_4 13 327 IPR001932 -
Prci8g0053 358 MobiDBLite consensus disorder prediction 338 358 - -
Prci8g0053 358 Gene3D - 1 330 IPR036457 -
Prci8g0053 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0053 Prci-Chr8 343799 349940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0053 1 332 PP2C-type Phosphatase Gene Family AT2G25070 79.217 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0053 K17499 - zju:107419763 640.188