Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0040 ATGGACTCAGCATGCGTGGATACTTCTCTCAACCTCAACGTGGTTCCTCGGGACACAAAAGTTAACGCGGCTGAGGATTTGGTGCAAGAGTTGCACCGTTTAAGCAGTGAGAACAAGAAGCTAACCGAGAGATTGACACACATGTGTCAGAACTACAATCTCTTGAAGAAGCAACTGAGCCAAGTGATGATCGTGAACACCAATAATCCTGATGAAAAGGATCAAACTAATCAACCAAGGAAAAGAAAGGCCGAGACGGATGCCTGTATCGGTAATATTAGTGTTAGCGGCAATACCGAGTGCAGGAACATCACTGACGAAGATTCATCATTCAGAAGGCCAGCCGCTAAGGTTTCCAGAGTCCTTCTGCGCACCCAAGCATCAGATACCGGCTTATATGTGAGGGATGGCTATCAGTGGAGGAAATATGGTCAGAAGGTGACTCGAGATAACCCTTCTCCCAGAGCTTACTTCAGGTGCTCCTTTGCACCAAGCTGCCCGGTGAAGAAGAAGGTGCAAAGGAGTGCAGAAGACCCGACAGTGTTGGTGGCAACCTACGAGGGAGAGCACAACCATGGACGAGATGGATCTGAAATACCATTACTAGCGTCAACCCAGAGAGAAAGCGATGGAGCCCTTGATTCAGGAGCAATGGCTGAAAATGGTGCAAAGTCAATGCAGCAGTGTTTGGTTCAACAAATGGCTACTTCTTTGACTAGAGATCCCAACTTTACAGCAGCGCTTGCCACCGCCATTTCCGGAAGAATTTTAAACCTTGCTTCTAATTAA 789 0.474 MDSACVDTSLNLNVVPRDTKVNAAEDLVQELHRLSSENKKLTERLTHMCQNYNLLKKQLSQVMIVNTNNPDEKDQTNQPRKRKAETDACIGNISVSGNTECRNITDEDSSFRRPAAKVSRVLLRTQASDTGLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPTVLVATYEGEHNHGRDGSEIPLLASTQRESDGALDSGAMAENGAKSMQQCLVQQMATSLTRDPNFTAALATAISGRILNLASN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0040 262 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 221 256 IPR044810 GO:0003700
Prci8g0040 262 Gene3D WRKY domain 118 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0040 262 FunFam WRKY transcription factor 40 119 196 - -
Prci8g0040 262 SMART WRKY_cls 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0040 262 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0040 262 SUPERFAMILY WRKY DNA-binding domain 132 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0040 262 ProSiteProfiles WRKY domain profile. 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0040 262 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0040 Prci-Chr8 297134 298863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0040 3 256 WRKY Transcription Factor Family AT1G80840 47.138 1.26e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g0040 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0040 - - pcin:129318830 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1089 2 8067741 8069313 Prci8g0040 8 297134 298863 CCT