Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0036 ATGGCAAAGTGTCACCGGAGCAACGTCGGACCCTTGATTCTTGATCGCCACGATCCTACCACTAATGCAGCCGTCGGCGGCCACTTCCGACTATGGAATGCACTCTCGGCCTCCTCACTCCGTCGTATCATTTTTGACGCCGTGAGCTGCGGCGGCGGCTCCCGTTATCACCACTCCCACTATGACGACTTCCGCTCCACTGTCTCAACCTCGACGTCAGCCTCCGCGAACTCGAAGGAGAAGCACCGAGAACAGAGGCAGGGACACTCCGAGTATAAGCGTAACTCCAATGAGAGGTCCGAGAAACTGTCGGATCTTCTGCATATAGCAGACTCCGAGGCCCGTGCCGAAACGAAAAAGAAGGAAGAGGCGTTGCGGGAGCTGAAGCAAATCGTGCAGGAGTTGCAAGCAGAGGACTTGACGAAGCGGCAAGTGGCAGCTTCAAATGTTAGATTGCTCGCCAAGGAAAACTTAGAAGTCAGAGGGACTCTCGCAATGCTTGGCGTCATTCCTCCTCTGGTTGGAATGCTTGACATGGAAGACGCTCTCTCTCATATCGCTTCTCTGTATGCGTTGCTCAATCTCGCGATCGGCAACGATGCAAATAAAGCAGCCATTGTCAAAGTTGGCGCTGTTCACAAGATGCTAAAGCTCATTGAATCTCTTACTGCTTTGGATTCATCAGTCTCTGAAGCGATTGTTGCAAATTTCCTTAGCTTGAGTGCTTTAGATTCAAACAAACCAATCATTGGATCCTCTGGTGCCATACCTTTCCTCGTTAGAGCCCTTGCAAATTTAGATAATAAATGTAGCTCTCAAGCTAAGCAAGATGCTCTACGAGCACTGTACAATCTTTCAATTCTCCCAACCAATATCTCATTCCTTTTGGAAACCGATTTGGTTCCACATCTGATAAACACAATAGGAGACATGGAGGTGAGTGAAAGAGTCCTTCTCATCTTGAGCAATCTGGCATCAACTCCAGAGGGCCGAAAAGCTATCAGTGCTGTGCGGGATGCATTCCCAATTCTGGTTGATGTGTTAAACTGGACAGATGCACCAGGATGCCAGGAGAAGGCATCCTACGTTTTGATGATTATGGCACACAAAGCTTATGGTGACAGGCAGGCCATGATTGAGGCTGGGATTGTGTCATCATTGCTCGAGTTGACACTTCTGGGTACCCCATTGGCACAAAAAAGAGCCTCTAGGATATTGCAATGTCTGAGAGTAGACAAAGGCAAGCAAATTTCAAGGAGTTGCAGTGGAAACTTACACGAAAATGTCTCTGCTCCTATCTGTGGCTCTTCATCATCTTGTACAAAGGCACATGGAGGTGGAAGAAGGTCTGTGGAGGGGCAGGAAGATATGATGAGCGAGGAGAAGAAAGCAGTGAAGCATCTAGTTCAGCAAAGTTTGCAGAATAACATGAGGAAAATTGTGAAGAGGGCTAACATACCCCAGGAGTTCGTTCCATCAGAACATTTTAAGTCACTCACTTCAAGTTCGACTTCGAAGAGCCTGCCGTTTTGA 1533 0.4814 MAKCHRSNVGPLILDRHDPTTNAAVGGHFRLWNALSASSLRRIIFDAVSCGGGSRYHHSHYDDFRSTVSTSTSASANSKEKHREQRQGHSEYKRNSNERSEKLSDLLHIADSEARAETKKKEEALRELKQIVQELQAEDLTKRQVAASNVRLLAKENLEVRGTLAMLGVIPPLVGMLDMEDALSHIASLYALLNLAIGNDANKAAIVKVGAVHKMLKLIESLTALDSSVSEAIVANFLSLSALDSNKPIIGSSGAIPFLVRALANLDNKCSSQAKQDALRALYNLSILPTNISFLLETDLVPHLINTIGDMEVSERVLLILSNLASTPEGRKAISAVRDAFPILVDVLNWTDAPGCQEKASYVLMIMAHKAYGDRQAMIEAGIVSSLLELTLLGTPLAQKRASRILQCLRVDKGKQISRSCSGNLHENVSAPICGSSSSCTKAHGGGRRSVEGQEDMMSEEKKAVKHLVQQSLQNNMRKIVKRANIPQEFVPSEHFKSLTSSSTSKSLPF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0036 510 Gene3D - 101 270 IPR011989 -
Prci8g0036 510 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 510 - -
Prci8g0036 510 SMART arm_5 199 242 IPR000225 GO:0005515
Prci8g0036 510 SMART arm_5 330 369 IPR000225 GO:0005515
Prci8g0036 510 SMART arm_5 243 287 IPR000225 GO:0005515
Prci8g0036 510 SMART arm_5 157 197 IPR000225 GO:0005515
Prci8g0036 510 SMART arm_5 288 326 IPR000225 GO:0005515
Prci8g0036 510 Coils Coil 114 141 - -
Prci8g0036 510 MobiDBLite consensus disorder prediction 77 107 - -
Prci8g0036 510 SUPERFAMILY ARM repeat 127 420 IPR016024 -
Prci8g0036 510 MobiDBLite consensus disorder prediction 70 107 - -
Prci8g0036 510 Gene3D - 271 421 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0036 Prci-Chr8 214823 216953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0036 117 410 U-box Gene Family AT2G23140 33.108 6.91e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0036 - - qsa:O6P43_015754 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1082 2 7970296 7973595 Prci8g0036 8 214823 216953 CCT