Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0031 ATGACGGTGGAGACCAGAATGGATGATCCCGGAGACCAGTTTCCTGTAGGAATGCGTGTTCTTGCCGTTGACGATGACCCGACTTGCCTCTACGTGTTGGAAACTCTTCTTCGAAGATGTCAATATAACGTGACAACGACTAGTCAGGCAAGAACAGCATTGAAGTTGCTGAGAGAAAGCAAAAACAAGTTTGACCTGGTTATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAACTACTCGAGCTTGTAGGACTTGAGATGGACTTACCAGTCATAATGTTGTCAGCATATGGTGACCCAAAGCTAGTGATGAAGGGAATTACTCATGGAGCATGTGATTATCTTTTAAAACCTGTTCGAATTGAAGAGCTAAAGAACATTTGGCAGCATGTTATCAGGCGGAAGAAGTTTGACTCGAAGGAGCAGAACAACCCCCACAACCATGACAAGCCTTATGCTGGTAGTGGCAGTGGCCTAGCATCAGCAGGAACAAGCAATATAGATCAAAAGATGACCAAGAAAAGGAAGGATCAGAATGATGAAGATGAGGACCATGATGAAGACCCATCAACACAGAAGAAGCCTCGGGTTGTCTGGACAGTGGAGCTGCACCGCAAATTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTGCCTAAAAAGATTCTTGATATGATGAATGTTGAAAAGCTTACTAGGGAGAATGTGGCTAGCCATCTCCAGAAATATAGGCTTTATCTGAAAAGAATCAGCTGTGTGGCAAACCAACAGGCTAATCTGGTGGCAGCCTTAGGTACTGCGGATCAATCCTATTGGAGAATGGGTTCTTTGAGTGGGCTCAGCCATTTGCAAACATTGAGTGCTTCTGGACAGTTCCAGAACAGTGTTTACAGATCCCTCCCATCTAGTGGGGTGATTGGTAGGTTGAACACTCCTGCTGGTCTGGGTGTGCATGGACTGCCTTCTTCAAGAAATATTCAGTTTGGTTGTTCACAGAATTTAAACAATTCTATGAATGATCCGCTCAAGTTCCAGTTAACCATCGTTCATACTAACCAAAATGGCAATGCAGTTCCGGGAATAGTAGGTTATACTGAGCGTGATCAATTACAACACCATAAGCATAAAGGCCTTAGTCCTGCTCAAGACCTGACCAATGCTATTGATGATAAAATGATTTTACCCATCTCTTGTGAACAACTTGATCCAACACAAAGAGTATCTGCCAGTTGCTCACTCACTCCACTTCTGAGTGTAAAAAACAACACTTTTATGGTAGAAGCACATTCTCAACACACACAACGGGGCAGAGCATATGAGAATTTATCTTCAACAGATTCTCAACCTTCAGAAATTTCTTGCTCTTTGCTGGATCAGGGTAGTTGTGGTGATTATTGGTCTGATAGTGTGCAGTCATCTCAAATCCATCCAAATTCTTATCCACCAACTCGGGGTTCTAGACAAGCAGTCGTACTTCCTACAGAGAACTTGACTTCTACGCCTTTGCATGTTAGGAATCCAAGTGGTGCTTCATCCATCACTTTAATGTACACTCAAGCCCCTGATGTAACAGAAAATTCGAATTCCCAAGTAGACATTTTTGCTAATACACCTGGGCAAATAAGCAGTGAAGTATCATTTCAAGGGTGGGATGACCGAAATCAGGATGCTGCTTACCATTCAAATGTTATTTGCAGCTCTATAAACTCTCTGATTCCTGTGAATGGCGGTGTTAGTGGACCAGCTAGTCCACCAGCAGACTCAACCTTCTACCGAAACTTGGACTTCAATTGTTGTGATCCCATACAAACCAAGCATGATGGGGTTGCAAAAGTGGCTGAAGCAATCTCATTGAAACAAGGTCAAGGGTATATCACAGGCCAGCAGAAGGCACAACAGAGTCGCATATCTAATAATCTGGGTTCACTGGATGACTTAGTCGGGTCAATGATGAAACAGGATGTAGACAAGGTGAAATTGTTGGATGGAGACCTCATGTGTAACAATTACACCGCGGGTTCATCTATGTGA 2043 0.4332 MTVETRMDDPGDQFPVGMRVLAVDDDPTCLYVLETLLRRCQYNVTTTSQARTALKLLRESKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDSKEQNNPHNHDKPYAGSGSGLASAGTSNIDQKMTKKRKDQNDEDEDHDEDPSTQKKPRVVWTVELHRKFVAAVNQLGIDKAVPKKILDMMNVEKLTRENVASHLQKYRLYLKRISCVANQQANLVAALGTADQSYWRMGSLSGLSHLQTLSASGQFQNSVYRSLPSSGVIGRLNTPAGLGVHGLPSSRNIQFGCSQNLNNSMNDPLKFQLTIVHTNQNGNAVPGIVGYTERDQLQHHKHKGLSPAQDLTNAIDDKMILPISCEQLDPTQRVSASCSLTPLLSVKNNTFMVEAHSQHTQRGRAYENLSSTDSQPSEISCSLLDQGSCGDYWSDSVQSSQIHPNSYPPTRGSRQAVVLPTENLTSTPLHVRNPSGASSITLMYTQAPDVTENSNSQVDIFANTPGQISSEVSFQGWDDRNQDAAYHSNVICSSINSLIPVNGGVSGPASPPADSTFYRNLDFNCCDPIQTKHDGVAKVAEAISLKQGQGYITGQQKAQQSRISNNLGSLDDLVGSMMKQDVDKVKLLDGDLMCNNYTAGSSM 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0031 680 PIRSF RR_ARR_type-B 1 678 IPR017053 GO:0003677|GO:0003700|GO:0009736
Prci8g0031 680 MobiDBLite consensus disorder prediction 140 197 - -
Prci8g0031 680 CDD REC_typeB_ARR-like 20 134 - -
Prci8g0031 680 SUPERFAMILY Homeodomain-like 193 253 IPR009057 -
Prci8g0031 680 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Prci8g0031 680 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 364 IPR045279 GO:0009736
Prci8g0031 680 SMART REC_2 18 130 IPR001789 GO:0000160
Prci8g0031 680 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Prci8g0031 680 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Prci8g0031 680 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 252 IPR017930 -
Prci8g0031 680 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
Prci8g0031 680 SUPERFAMILY CheY-like 17 141 IPR011006 -
Prci8g0031 680 FunFam Two-component response regulator 192 255 - -
Prci8g0031 680 Gene3D - 17 153 - -
Prci8g0031 680 Gene3D - 192 255 - -
Prci8g0031 680 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0031 Prci-Chr8 154528 159185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0031 1 676 Response Regulator Gene Family AT2G25180 44.413 2.76e-138 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci8g0031 Response_reg 6.9e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0031 K14491 - gmx:100809002 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1076 2 7919154 7923073 Prci8g0031 8 154528 159185 CCT
Prci8g0031 8 154528 159185 Prci8g0031 8 154528 159185 ECH