Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0024 ATGGTTGATGGTTCACACAAACGTCGTTGCTTCGCGTCTTGTTGTTGCGTATGGATTTTCAGTCCGGGAACCCAGGGTTTGCTGCGTTTGCAGGAGCGAGGCGTAGCTGAAGCAAGAATGGCGGGCATCAGTGATCGGAAGAAGGTTCCGGCGATGCCGTCGCACAAGACGTTCAGGGTGAAGAAGAAGCTGGCCAAGAAGATGAGGCAGAACAGGCCTATCCCCTACTGGATCCGCGCGAGGACCGACAATACCACCAGGTACAATGCCAAGCGCCGCCGCCGGCGTCGGACCAAGCTTGGATTCTGA 309 0.5663 MVDGSHKRRCFASCCCVWIFSPGTQGLLRLQERGVAEARMAGISDRKKVPAMPSHKTFRVKKKLAKKMRQNRPIPYWIRARTDNTTRYNAKRRRRRRTKLGF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0024 102 Pfam Ribosomal L39 protein 60 100 IPR000077 GO:0003735|GO:0005840|GO:0006412
Prci8g0024 102 PANTHER RIBOSOMAL PROTEIN L39E 44 102 - -
Prci8g0024 102 SUPERFAMILY Ribosomal protein L39e 54 101 IPR023626 -
Prci8g0024 102 MobiDBLite consensus disorder prediction 46 65 - -
Prci8g0024 102 Gene3D Ribosomal protein L39e 52 102 IPR023626 -
Prci8g0024 102 FunFam 60S ribosomal protein-like L39 52 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0024 Prci-Chr8 115345 115924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0024 52 102 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 82.353 3.24e-25 87.8