Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0022 ATGGCGGCATTTTCTCCAGACGTTCAGGCGGGGAATGAATGGAACCGAACAGATTCAGACGTGAAAGTGGTAGTTGCCATCGTCGTGGCCGGCACTGCACTTGGTGCGGTCATTTTGTCTCTGTCATGCTACTGGCTTTATTACAGGAAGTGTCCTTCCAAATTAAGCAGTGAAAATGTCCAAAGCTCAGATGCGGAGAAAGGGCCGGCAACAGCTCCATCTTTGAGAAAATTTGTTTCCTTCAAGATGGATGGTAAGAAGGGGTCCGTTCCAATAATTGATCATAAGACCATAGAAAAAGCGACGAACAATTTTCTGGAAAGTAACATCTTGGGAGAGGGCGGATTTGGATGCGTTTACAAAGCTCGATTAGATGATAACTTGGACGTTGCCGTCAAGAAATTGCACTGTGAAAGCCAGGACGCTGAGAGAGAATTTCAGAACGAGGTGGACTTGTTGAGTAAAATTCAGCATCCAAATGTAATCTCTTTCCTGGGCTGTAGCAGTAATGGCGACACGAGGTTTATTGTCTATGAATTGATGCGAAAGGGATCGCTGGAGACTCAATTACATGGACCCTCTCACGGCTCGGCGTTGACTTGGCACATGAGGATAAAGATTGCTCTTGACACAGCAAGAGGATTAGAATACCTGCATGAAATCTGTAACCCTCCGGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGACACAAATTTCAATGCCAAGATTTCCGATTTCGGTCTTGCCATAGCTGATAGGTCCCAAGACAAGAATGACATTAAACTCTCAGGCACATTGGGATATGTAGCCCCGGAGTATATATTAGATGGTAAATTAACTGATAAAAGCGATGTGTATGCATTCGGGGTGGTGCTTCTAGAGCTTCTATTAGGGAGGAAGCCCGTGGAAAAGCTAGCACCAACACAATGCCGGTCAATTGTGACATGGGCGATGCCACAGCTCACCGACAGATCCAAGCTTCCGAACATCGTGGATCCCAAGATCAAGGACACAATGGATCCCAAGCATTTATATCAGGTTGCCGCCGTGGCTGTGCTGTGCGTGCAAACGGAACCGAGTTACCGTCCGCTGATTACAGATGTTCTCCACTCGCTCATCCCTCTTGTTCCTGTTCAGCTCGGAGGAACACTGAGGGTTCCACAAGCGTCACAGCCTCCCCCTTCAACGTAA 1200 0.4667 MAAFSPDVQAGNEWNRTDSDVKVVVAIVVAGTALGAVILSLSCYWLYYRKCPSKLSSENVQSSDAEKGPATAPSLRKFVSFKMDGKKGSVPIIDHKTIEKATNNFLESNILGEGGFGCVYKARLDDNLDVAVKKLHCESQDAEREFQNEVDLLSKIQHPNVISFLGCSSNGDTRFIVYELMRKGSLETQLHGPSHGSALTWHMRIKIALDTARGLEYLHEICNPPVIHRDLKSSNILLDTNFNAKISDFGLAIADRSQDKNDIKLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPTQCRSIVTWAMPQLTDRSKLPNIVDPKIKDTMDPKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPVQLGGTLRVPQASQPPPST 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0022 399 Gene3D Transferase(Phosphotransferase) domain 1 181 380 - -
Prci8g0022 399 FunFam Protein kinase superfamily protein 72 180 - -
Prci8g0022 399 FunFam probable receptor-like protein kinase At1g80640 181 380 - -
Prci8g0022 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Prci8g0022 399 SMART serkin_6 105 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0022 399 PANTHER OS01G0750732 PROTEIN 23 377 - -
Prci8g0022 399 CDD STKc_IRAK 111 378 - -
Prci8g0022 399 SUPERFAMILY Protein kinase-like (PK-like) 89 375 IPR011009 -
Prci8g0022 399 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Prci8g0022 399 Pfam Protein tyrosine and serine/threonine kinase 109 373 IPR001245 GO:0004672|GO:0006468
Prci8g0022 399 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Prci8g0022 399 ProSiteProfiles Protein kinase domain profile. 105 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0022 Prci-Chr8 104848 108392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0022 23 379 Receptor kinase-like Gene Family AT3G58690 43.526 6.03e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Prci8g0022 PK_Tyr_Ser-Thr 8.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0022 - - pcin:129318734 785.408