Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci891g0003 ATGCAATTCGGCTTTCCTGTTTCTTGTTTTGCTCCAATCCTCGTTATCTCCGCCGACCCGGCGTTCAACGATGATGTATTGGGGTTGATTGTGTTCAAAGAGGGTCTAAAAGACCCAAAGGCGATGCTCTCTAGTTGGAATGAAGATGACGATAGTCCCTGCAACTGGGTCGGAGTCAAATGTGACCCGACGACCCGTAGGGTCTCTGCTTTAGTACTTGACGGGTTTTCTCTTTCAGGGCATATTGATCGAGGGCTTTTGAGATTGCAGTTTCTTCAAGTTCTTTCACTTTCCAGAAACAACTTCACAGGGACCATAATCCCTGATCTTCCTCGTCTCTGGAATTTGCAACTTGTTGATTTGAGCGAGAACAATCTCTCTGGATCAATCCCACAAGAATTTTTCCAACAATGTGGGTCTTTAAGAGCGGTTTCATTTGCCAGAAACAATCTTTCAGGTAAAATTCCTGATTCTTTAAGCTCTTGCTCTATGTTAGCTACTGTTAACTTCTCCCACAATCAACTTTCTGGAGAATTGCCCTCTGGGATTTGGTATTTGAGGGGATTACAGTCACTTGATCTGTCCAACAATTTGGAGGGAGAGGTTCCTGAGGGAATTGAGAGCTTGAATGATTTAAGAGAGTTAAATCTACAGAAGAATCGATTTATTGGTAGGCTTCCGGAGGGTATTGGAGGTTGCTTGCTCTTGAAATCACTTGATTTTAGTGATAATTTTCTCTCTGGGAGACTTCCTGGCTCAATGCAGAAACTCAGTTCATGCACCTCTCTCAGTTTACAGGGAAATTCATTCACTGGAGGCATTCCTGATTGGATTGGAGAGCTGAAAAATCTGGAGATATTGGACCTTTCTGCAAATGCTTTTTCAGATTGGATTCCCAAATCAATAGGAAATCTTGATTCACTGAATAAATTAAATCTCTCGAGGAATCAACTTACAGGAATTTTGCCTGAGTCAATGGGCAACTGTGTTAAGCTTTTGGCTCTTGACATGAGCCACAATCAGTTATCAGGCCGCATTCCTTCATGGATTTTTAAGATGGGTTTAAAAAGTATTTCACTTACGTGGAACAACTTCACGAGCAATAGTTCTTCGCTTTCATCCACATCGACGTCTTATTATGGCCTCCAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGGCCTTCCATCTATTATTGGGGGTCTTAGTAGCTTGCAAGTCTTGAATATGTCCAATCATATCTCTGGTGCTATTCCAGTGAGTATAGGAGAGCTTAAATCTTTGTTCATTCTTGACCTAAGTGGCAACAAGATTAATGGAAGCATTCCCTCTGAAATAGAAGGGTTGATTTCACTGAGTGAACTGAGACTGCAGAAGAATTTCCTGAGTGGGAGAATTCCGACCCAAATTGACAAGTGCTCATCCCTGACATCTTTGAATCTTTCTCACAACATGCTCACTGGTTCAATTCCTCCCGCCATTGCGAACCTAGCTAATCTCCAGCACATAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCCACCTTTTCTCCTTTAATGTTTCCTACAACCACCTTCATGGCGAGCTACCAGTGGGTGGCTTCTTCAATACCATCTCTCCCTCATCTGTCTCTGCTAATCCATCGTTATGTGGTTCCATTGTTAATCACTCCTGCCCATCCGTCCATCCCAAACCAATTGTCCTCAACCCAAACTCTTCTGGCTCAAATTCTGGTCCTTCCGCTCAAAACCGTCATCATAAGAAGGTCATTCTCAGTATCTCTGCCCTTATTGCTATTGGAGCTGCTGCTTTTATCACCATTGGTGTGGTGGCTGTTACACTGCTAAATATACATGCACGTCACTCATTGTCACGTTCCGCTGCACCGTTTGCGCTATCTGGTGGTGAAGATTATAGTTGTTCGCCCCAAAATGATCCAAGCTATGGCAAACTTGTAATGTTTACTGGTGATGCTGAATTTTCTGATGGCGCTCATAATCTTCTTAATAAAGACAATGAGATTGGTCGTGGTGGGTTTGGAGTTGTCTATTATCGTACTATTCTCCGAGATGGGCGTTCTGTTGCAATCAAGAAGCTTACAGTCTCTAGTCTGGTCAAGTCCCAAGAAGACTTTGAGAGGGAAGTGAAAACACTTGGGAAGATGAGGCACCATAATCTTGTGGCACTTGAAGGTTACTACTGGACTTCATCCTTGCAGCTCCTGATATATGAGTACCTGTCCAGAGGAAGCTTACATAAGCTTTTACATGATGAAAATGCGAAAGATATCCTATCATGGCGGCAAAGGTTCAAGATTATTCTTGGCATGGCAAAAGGGCTAGCCCATTTGCACCAAATGAACATAATTCACTACAATCTCAAATCAACAAATGTTCTGATTGACTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTATTGCCAATGCTAGACCATTGTGTCTTGAGCAGCAAAATTCAAAGTGCACTCGGTTACATGGCGCCCGAGTTTGCTTGCCGCACAGTGAAGATAACCGAGAAATGTGATCTATACGGGTTTGGGATCCTGGTTCTGGAGGTAGTAACTGGAAAAAGACCTGTGGAATATATGGAGGATGATGTGGTTGTCCTCTGTGACATGGTAAGAGGCGCATTGGAGGAAGGGAAGGTGGAGCAATGTATTGATGCAAAGCTTCTGGGAAATTTTGCTGCAGAAGAAGCAATTCCTGTGATAAAATTAGGGTTAATCTGTGCATCACAAGTGCCATCAAACCGTCCAGACATGGCTGAAGTAATCAACATATTAGAGTTGATACAGTGCCCTTCAGAAGGACAAGAGGAAATCGAATGA 2889 0.4306 MQFGFPVSCFAPILVISADPAFNDDVLGLIVFKEGLKDPKAMLSSWNEDDDSPCNWVGVKCDPTTRRVSALVLDGFSLSGHIDRGLLRLQFLQVLSLSRNNFTGTIIPDLPRLWNLQLVDLSENNLSGSIPQEFFQQCGSLRAVSFARNNLSGKIPDSLSSCSMLATVNFSHNQLSGELPSGIWYLRGLQSLDLSNNLXEGEVPEGIESLNDLRELNLQKNRFIGRLPEGIGGCLLLKSLDFSDNFLSGRLPGSMQKLSSCTSLSLQGNSFTGGIPDWIGELKNLEILDLSANAFSDWIPKSIGNLDSLNKLNLSRNQLTGILPESMGNCVKLLALDMSHNQLSGRIPSWIFKMGLKSISLTWNNFTSNSSSLSSTSTSYYGLQVLDLSSNAFSGGLPSIIGGLSSLQVLNMSXNHISGAIPVSIGELKSLFILDLSGNKINGSIPSEIEGLISLSELRLQKNFLSGRIPTQIDKCSSLTSLNLSHNMLTGSIPPAIANLANLQHIDLSWNELSGSLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNTISPSSVSANPSLCGSIVNHSCPSVHPKPIVLNPNSSGSNSGPSAQNRHHKKVILSISALIAIGAAAFITIGVVAVTLLNIHARHSLSRSAAPFALSGGEDYSCSPQNDPSYGKLVMFTGDAEFSDGAHNLLNKDNEIGRGGFGVVYYRTILRDGRSVAIKKLTVSSLVKSQEDFEREVKTLGKMRHHNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENAKDILSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDLYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCIDAKLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEEIE 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci891g0003 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 23 301 - -
Prci891g0003 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 758 959 - -
Prci891g0003 964 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Prci891g0003 964 Gene3D Transferase(Phosphotransferase) domain 1 758 962 - -
Prci891g0003 964 SMART LRR_typ_2 210 234 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 404 426 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 282 305 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 524 548 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 500 523 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 428 452 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 113 137 IPR003591 -
Prci891g0003 964 SMART LRR_typ_2 306 329 IPR003591 -
Prci891g0003 964 Gene3D Ribonuclease Inhibitor 22 299 IPR032675 -
Prci891g0003 964 SUPERFAMILY L domain-like 40 371 - -
Prci891g0003 964 ProSiteProfiles Protein kinase domain profile. 680 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci891g0003 964 Gene3D Ribonuclease Inhibitor 300 576 IPR032675 -
Prci891g0003 964 SUPERFAMILY L domain-like 287 552 - -
Prci891g0003 964 SMART LRR_sd22_2 428 454 - -
Prci891g0003 964 SMART LRR_sd22_2 500 526 - -
Prci891g0003 964 SMART LRR_sd22_2 186 209 - -
Prci891g0003 964 SMART LRR_sd22_2 282 308 - -
Prci891g0003 964 Pfam Protein kinase domain 681 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci891g0003 964 SUPERFAMILY Protein kinase-like (PK-like) 682 949 IPR011009 -
Prci891g0003 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 302 574 - -
Prci891g0003 964 Gene3D Phosphorylase Kinase; domain 1 665 757 - -
Prci891g0003 964 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Prci891g0003 964 Pfam Leucine rich repeat 383 441 IPR001611 GO:0005515
Prci891g0003 964 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Prci891g0003 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 674 757 - -
Prci891g0003 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 320 953 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci891g0003 7 963 Receptor kinase-like Gene Family AT3G56370 61.036 0.0 1125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci891g0003 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci891g0003 - - gmx:100790365 1498.8