Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci876g0005 ATGGACGACTCCAAGGCGCTCGGAACTTTCAACCCTAGTAGCGATGGAGCAAAAGCAAAGAAGCCGAAGGTGGTAGTGATAATGGGTCCCACTGGCTCTGGGAAGTCCAAGCTTGCCATTGATTTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCGCCAACAAAGTTCCGCTCTCCGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACCGTAAGTCCAAACGTTGAATTTACAGCTAAAGACTTTCGAGATTCTGCTATCCCTCTCATCAATGACATCTGTGCTCGCAACTGCTTGCCCGTCATAGTTGGGGGCACGAATTATTACATCCAGGCTCTCGTGAGTCCGTTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTTTATGGACAACCTTTCCGGTACTGGACCATTGGATAAGTATTTCATCCCTGAAAAGGACAGTTCAGACAATAATTATGAATTGCTTAAAGATGTTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAGCTTGTATGCTCGCACTGGAGTTCTTCCTAGCAAAATTTTCCAAGGAAAAGCTGCAGAGAAGTGGGGTCAAGTTGGTAACTTGAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTTCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACAATCCAAATGCTGATTATAGTCGTGGCTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTGGGAACCCGTGTATTTGAAGAAATCTACAAAAGAGAGAAAGAATCGACCGAGGATTCCAGGAGAGAAAAGTGTGATAAATTGTCTGATGATGATCTGATGGGGCTCTTGAAGTTGTCTTCTGACACAAAAGCCATTACACTTATGGAAGAAGCAATTGAAAAAGTAAAGGTTAACACGCAGAGACTAGTTCGCCGTCAGAAGAGGATGCTTAATCGACTGCAAAAATTGTTTGATTGGACTATTCACTACGTGGATTCCACAGAATCATTATCAAGTAAATCAGATGATATATGGACTGGCCAAGTGGTAGAACCTGCGGTGAAGATCGTTAGATCTTTCCTTGGCCAGAATCAGAACTTGTCATCCACGTCAGGGACGTCGAATAGCAGTGGGAGGAAGATGGTTGAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGGGATAGGGTGCTTAGAGGGATTCATGATTGGGAACAACACAAACAGGGACGTGGACACCGGAAACGTATTTCTAGCCTCAAGAACAAATCACGAGGCCTCTGTTCGCCGGAACAATAG 1422 0.4473 MDDSKALGTFNPSSDGAKAKKPKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLANKVPLSDQKGVPHHLLGTVSPNVEFTAKDFRDSAIPLINDICARNCLPVIVGGTNYYIQALVSPFLLDESVEDMDETFMDNLSGTGPLDKYFIPEKDSSDNNYELLKDVDPVAANRMHPNNHRKISQYLSLYARTGVLPSKIFQGKAAEKWGQVGNLRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNPNADYSRGLRQAIGVREFEPLLGTRVFEEIYKREKESTEDSRREKCDKLSDDDLMGLLKLSSDTKAITLMEEAIEKVKVNTQRLVRRQKRMLNRLQKLFDWTIHYVDSTESLSSKSDDIWTGQVVEPAVKIVRSFLGQNQNLSSTSGTSNSSGRKMVERDLWTQYICKACGDRVLRGIHDWEQHKQGRGHRKRISSLKNKSRGLCSPEQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci876g0005 473 Pfam IPP transferase 57 354 - -
Prci876g0005 473 Gene3D - 22 425 IPR027417 -
Prci876g0005 473 MobiDBLite consensus disorder prediction 449 473 - -
Prci876g0005 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 261 IPR027417 -
Prci876g0005 473 Gene3D - 157 212 - -
Prci876g0005 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 21 400 IPR039657 -
Prci876g0005 473 FunFam tRNA dimethylallyltransferase 424 467 - -
Prci876g0005 473 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 24 300 IPR018022 GO:0008033
Prci876g0005 473 Gene3D Classic Zinc Finger 426 466 - -
Prci876g0005 473 Hamap tRNA dimethylallyltransferase [miaA]. 24 377 IPR018022 GO:0008033
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci876g0005 10 463 C2H2 Transcription Factor Family AT2G27760 56.494 6.71e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci876g0005 K00791 - gmx:100792690 672.544