Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci876g0003 ATGGACGACTCCAAGGCGCTCGGAACTTTCAACCCTAGTAGCGATGGAGCAAAAGCAAAGAAGCCGAAGGTGGTAGTGATAATGGGTCCCACTGGCTCTGGGAAGTCCAAGCTTGCCATTGATTTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCGCCAACAAAGTTCCGCTCTCCGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACCGTAAGTCCAAACGTTGAATTTACAGCTAAAGACTTTCGAGATTCTGCTATCCCTCTCATCAATGACATCTGTGCTCGCAACTGCTTGCCCGTCATAGTTGGGGGCACGAATTATTACATCCAGGCTCTCGTGAGTCCGTTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTTTATGGACAACCTTTCCGGTACTGGACCATTGGATAAGTATTTCATCCCTGAAAAGGACAGTTCAGACAATAATTATGAATTGCTTAAAGATGTTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAGCTTGTATGCTCGCACTGGAGTTCTTCCTAGCAAAATTTTCCAAGGAAAAGCTGCAGAGAAGTGGGGTCAAGTTGGTAACTTGAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTTCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACAATCCAAATGCTGATTATAGTCGTGGCTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTGGGAACCCGTGTATTTGAAGAAATCTACAAAAGAGAGAAAGAATCGACCGAGGATTCCAGGAGAGAAAAGTGTGATAAATTGTCTGATGATGATCTGATGGGGCTCTTGAAGTTGTCTTCTGACACAAAAGCCATTACACTTATGGAAGAAGCAATTGAAAAAGTAAAGGTTAACACGCAGAGACTAGTTCGCCGTCAGAGCTTCGACGGTAGCCCGGCCACTGAAGCTGAGCCTCGGCGGCGGCGGTTTGGCGGCTGGCTGCGGGTTTCAAAGAAGAGGATGCTTAATCGACTGCAAAAATTGTTTGATTGGACTATTCACTACGTGGATTCCACAGAATCATTATCAAGTAAATCAGATGATATATGGACTGGCCAAGTGGTAGAACCTGCGGTGAAGATCGTTAGATCTTTCCTTGGCCAGAATCAGAACTTGTCATCCACGTCAGGGACGTCGAATAGCAGTGGGAGGAAGATGGTTGAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGGGATAGGGTGCTTAGAGGGATTCATGATTGGGAACAACACAAACAGGGACGTGGACACCGGAAACGTATTTCTAGCCTCAAGAACAAATCACGAGGCCTCTGTTCGCCGGAACAATAG 1497 0.4589 MDDSKALGTFNPSSDGAKAKKPKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLANKVPLSDQKGVPHHLLGTVSPNVEFTAKDFRDSAIPLINDICARNCLPVIVGGTNYYIQALVSPFLLDESVEDMDETFMDNLSGTGPLDKYFIPEKDSSDNNYELLKDVDPVAANRMHPNNHRKISQYLSLYARTGVLPSKIFQGKAAEKWGQVGNLRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNPNADYSRGLRQAIGVREFEPLLGTRVFEEIYKREKESTEDSRREKCDKLSDDDLMGLLKLSSDTKAITLMEEAIEKVKVNTQRLVRRQSFDGSPATEAEPRRRRFGGWLRVSKKRMLNRLQKLFDWTIHYVDSTESLSSKSDDIWTGQVVEPAVKIVRSFLGQNQNLSSTSGTSNSSGRKMVERDLWTQYICKACGDRVLRGIHDWEQHKQGRGHRKRISSLKNKSRGLCSPEQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci876g0003 498 Gene3D Classic Zinc Finger 450 491 - -
Prci876g0003 498 MobiDBLite consensus disorder prediction 474 498 - -
Prci876g0003 498 Gene3D - 157 212 - -
Prci876g0003 498 FunFam tRNA dimethylallyltransferase 449 492 - -
Prci876g0003 498 Pfam IPP transferase 57 352 - -
Prci876g0003 498 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 24 299 IPR018022 GO:0008033
Prci876g0003 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 261 IPR027417 -
Prci876g0003 498 Hamap tRNA dimethylallyltransferase [miaA]. 24 389 IPR018022 GO:0008033
Prci876g0003 498 Gene3D - 22 449 IPR027417 -
Prci876g0003 498 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 21 352 IPR039657 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci876g0003 10 488 C2H2 Transcription Factor Family AT2G27760 52.977 7.85e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci876g0003 K00791 - gmx:100792690 658.677