Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci860g0003 ATGAGAGTTCCTTTCTTTATCTTCTTTCATATCATATCATTATCCGTGTGCATTGAGCCACACACGGCAGACGGGACCAAAGCTATCAGCTTCAGAACTTTCCATGAATATCAGGCGAGAAGAATTCTGCACCAACCGTTGTTCCCGGAAGGTTCTGCTCCACCACCAGCCGCAGTCGAGTCGCCGCCACCGCCGCCTCCGGACACCCCATCTTCTCCCGACATTCCTTTCTTTCACGAGAATCCCGTGGGACCAACGCCAGATCAGAATCAGACACCGCCGGCGATTCCCAATGGGACAATAGTTTCGAACCCGACGGCGACAACGCCGGCGAACAAGCCCACGAAGAAGGTCGCAATTGCCATGTCTGTTGGAATTGTGACGCTCGGTATGCTCTCGGCACTTGCCTTCTTCTTGTACAGACACCGTGTGAAGCACCCTAGTGAGACCCAGAAGCTCGTGGGTGGGAATTCTCGGGGGATTGAGGAGGATTCTTCGGGGGCCCCACCGTCGAACTTTCTGTACATTGGGACGGTGGAGCCTCCACGAACTGAATCAGTAAGTGAGCCCATCGAGTCCAACGGAGGAAACAAGTCGCCTTATCATAAGCTGAATCCTCCAAAGCGATCCGATCGGTACCGGCCAAGCCCTGAATTGCAGCCATTGCCGCCGCTAACTAAGCCACCAGATGGGAATTACCCTCCGGCGATATCTTCGTCGTCGTCGTCTTCGTCCGACGAGGAAAGCCACGACATGGCGTTTCATACGCCGCACGGATCATCGGTGAGCTGCGAGGATGGCTATTATACTCCAATTTCGCGCCAGAGTTCTCTGGCTAACGGTAGCCCGACGGTGACTACAAGGAGTGAGGCTCATTCCACTAATTATCATCCTTTTTCAAAGAGAACGTCACCAAAATCTCGCTTGTCTGCTTCTTCGCCGGAGGTAAGGCCTGTCATTATACCATCTATAAAGCAGACTCCACCGCCTCCTCCTCCTCCGCCACCTCGATCGACACCGTTTCAGCATGTAGATAAACAAGTGGCCTCCGGTGCTTCTAGAAGGCCTAAATTCTCAGCGCCACCTCCGGCACCGAATTTGATGCATCTCCGGTCAACAGACTCCACACTCCAGGACACGTCGAGGACTTCCCCAAAATATCCTCCTCCGCCTCCGCCACCCCCTCCTCCTCCACCGCGACACCCTCAAACAACACCAAGGAAAACAGTTTCTCCGGCAATTAGTGTTCCCTCATCCTCTCCATCGAGAAAGCAACAGTCGTGGTCTGCAAGTGAAGGAGCTGCTTCTGGTAAAAGTGTAACAAAAGCTTCAGACTCTGAGCATGTTGATCAAAGGCTCGCCTCTTCCGAGAGGATGGAAGCCGATGACATGGACGGAGGGAAACCCAAGTTAAAGGCTTTGCACTGGGATAAAGTGCGAGCAACCTCAGATCGTGCTACTGTGTGGGACCAGCTAAAATCAAGCTCATTTCAACTGAATGAGGACATGATGGAGAGCCTGTTTGGCTGCAATTCTACAAATGTCGTTCCCAGAGAACCTCCAAGAAAATTAGTTCTTCCTCCTGTTGATCAGGAAGAGAAGGTGCTGGACCCGAAGAAGTCACAGAACATAGCTATACTGCTAAGGGCACTAAATGTGACGAGAGATGAAGTGTGCGAAGCTCTTTTGGACGGTAATCCTGAAGGTTTGGGTACTGAGCTGTTTGAAACTCTGGTAAAGATGGCTCCCACTAAGGAGGAAGAGATAAAGCTTAAAAAGTATGATGGTGACCTTTCAAAACTTGGGTCTGCAGAAAGATTTCTCAAAGCGGTGCTTGATATCCCTTTTGCTTTTAAAAGAGTCGAGGCCTTGCTATACAGAGCTAACTTTGATACTGAAGTTAATTACCTGAAGAAGTCTTTTCAATCCCTTGAGGCAGCAAGTGAGGAATTGAAGAACAGTCGGCTGTTCCTCAAACTGCTCGAAGCTGTTCTTAGGACAGGAAACAGAATGAATGTTGGCACCAATCGTGGTGATGCTAAAGCTTTTAAACTGGAGACGCTGCTAAAACTGGTGGACATAAAGGGAACTGATGGTAAGACTACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGGCAGTGATTCCGCACATGAGAGTGTTCAGGAGAAAATGAGTTCCAAATTCAATGAGGATGAATTCAAGAAGCAAGGATTGCAGGTTGTGTCTGGACTAGGTAGAGACCTCAGCAATGTCAAGAAAGCAGCAACAATGGATTCAGATGTCTTAAGCAGCTATGTCGCAAAGCTCGAAATGGGGCTTGAGAAAGTGAGATCTGTTATGCTATACGAAAAATCAGATATGGAAGGGAATTTCTTCAACTCCATGAAGCTATTTCTGAGAGATGCTGAAGAGAAAATTGTTAGGATTAAGGATGATGAAAGAAAGGCTTTATTACTTGTGAAAGAAGTGACAGAGTACTTTCATGGGGATACAGCAAAGGAAGAAGCCCACCCTCTCAGAATCTTCATGATTGTAAGGGACTTTCTAAATATTTTGGATCAAGTGTGCAAAGAAGTTGGAAGGATGCAGGATAGAGTTATGGTTGGTGCTGCAAGATCTTTCAGGATAGCTGCTAGTGCATCACTGCCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAAGAAAGTTCATCTCCATAG 2730 0.4821 MRVPFFIFFHIISLSVCIEPHTADGTKAISFRTFHEYQARRILHQPLFPEGSAPPPAAVESPPPPPPDTPSSPDIPFFHENPVGPTPDQNQTPPAIPNGTIVSNPTATTPANKPTKKVAIAMSVGIVTLGMLSALAFFLYRHRVKHPSETQKLVGGNSRGIEEDSSGAPPSNFLYIGTVEPPRTESVSEPIESNGGNKSPYHKLNPPKRSDRYRPSPELQPLPPLTKPPDGNYPPAISSSSSSSSDEESHDMAFHTPHGSSVSCEDGYYTPISRQSSLANGSPTVTTRSEAHSTNYHPFSKRTSPKSRLSASSPEVRPVIIPSIKQTPPPPPPPPPRSTPFQHVDKQVASGASRRPKFSAPPPAPNLMHLRSTDSTLQDTSRTSPKYPPPPPPPPPPPPRHPQTTPRKTVSPAISVPSSSPSRKQQSWSASEGAASGKSVTKASDSEHVDQRLASSERMEADDMDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSTNVVPREPPRKLVLPPVDQEEKVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELFETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEALLYRANFDTEVNYLKKSFQSLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGSDSAHESVQEKMSSKFNEDEFKKQGLQVVSGLGRDLSNVKKAATMDSDVLSSYVAKLEMGLEKVRSVMLYEKSDMEGNFFNSMKLFLRDAEEKIVRIKDDERKALLLVKEVTEYFHGDTAKEEAHPLRIFMIVRDFLNILDQVCKEVGRMQDRVMVGAARSFRIAASASLPVLNKYHARQDRSSDEESSSP 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci860g0003 909 MobiDBLite consensus disorder prediction 443 469 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 150 469 - -
Prci860g0003 909 ProSiteProfiles Formin homology-2 (FH2) domain profile. 461 884 IPR015425 -
Prci860g0003 909 MobiDBLite consensus disorder prediction 233 247 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 384 405 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 217 231 - -
Prci860g0003 909 Gene3D Formin, FH2 domain 457 870 IPR042201 -
Prci860g0003 909 MobiDBLite consensus disorder prediction 48 114 - -
Prci860g0003 909 SMART it6_source 461 873 IPR015425 -
Prci860g0003 909 MobiDBLite consensus disorder prediction 369 383 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 93 113 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 266 311 - -
Prci860g0003 909 SUPERFAMILY Formin homology 2 domain (FH2 domain) 389 871 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 49 73 - -
Prci860g0003 909 MobiDBLite consensus disorder prediction 323 340 - -
Prci860g0003 909 Pfam Formin Homology 2 Domain 467 858 IPR015425 -
Prci860g0003 909 PANTHER FORMIN-RELATED 6 903 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci860g0003 909 MobiDBLite consensus disorder prediction 406 442 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci860g0003 399 899 FH2 protein (formin) Gene Family AT5G67470 66.270 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci860g0003 - - pcin:129322910 1160.59