Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci857g0002 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACAAGATTATCATCAAACAAATGAGACAAGCGAGCTTCCACCCCTGCCTCCACAAGCCCCTCATATGGGCTCAATCAGGCCTGGATCGATGGCTGATAGAGCCCGGCTAGCCAAGATACCGCCACCGGAGGCAGCTCTGAAGTGTCCTCGCTGCGAATCTACCAACACAAAATTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCTAGGCACTTCTGCAAGACCTGTCGGCGTTACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCGGTGGGCGGAGGATGCCGCAGAAACAAGAAGACCAAGGGAAGCCGCTCCAAGTCTCCTGCAGTCTCCGACAAACAGCCACTGTCGTCCGATCCCTCGGGCGGGGCCGCAGCCTCCGAGCTGATCGGTCAATTGCCGCCCCACGCATCTAATTTACCTTTCATGGCTTCGTTACAGAATCTGAGCCGCTGTGGCGTGGGAAGCATGGGCCTCAACTTGCAAGGGCAGAGCGATCACCACATTTTTCCCATAGGACTTAATGGAAGTAATATTTCAAGCGTAGGAGTGGACCAGTGGCGGCTACAGCAGTTTCCTTTCTTGAATGGTTTTGATCAGTCAAGTTCAGCTGCAAACCCATTCCAAAGCCAAGTTGGGGGTTCTAGGGTTACACAGCTGCCTCCAGTTAAATTGGAAGACAGTGGAGCCTTAAACTTGTCTAGGTCACAAGCTCCGAGCACGTCGGAAAATAACAACCAATACTATTCATGGACTCCTACCACAGATAATATATCTGGTCTTGCCTCCTCTTCCACGACCCATGTCTTGTAA 870 0.5161 MVFSSIPVYLDPPNWQQQQDYHQTNETSELPPLPPQAPHMGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKGSRSKSPAVSDKQPLSSDPSGGAAASELIGQLPPHASNLPFMASLQNLSRCGVGSMGLNLQGQSDHHIFPIGLNGSNISSVGVDQWRLQQFPFLNGFDQSSSAANPFQSQVGGSRVTQLPPVKLEDSGALNLSRSQAPSTSENNNQYYSWTPTTDNISGLASSSTTHVL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci857g0002 289 MobiDBLite consensus disorder prediction 126 140 - -
Prci857g0002 289 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Prci857g0002 289 MobiDBLite consensus disorder prediction 108 147 - -
Prci857g0002 289 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677|GO:0006355
Prci857g0002 289 MobiDBLite consensus disorder prediction 252 272 - -
Prci857g0002 289 MobiDBLite consensus disorder prediction 13 30 - -
Prci857g0002 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 218 IPR045174 GO:0003700|GO:0006355
Prci857g0002 289 MobiDBLite consensus disorder prediction 13 42 - -
Prci857g0002 289 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci857g0002 34 288 C2C2-Dof Transcription Factor Family AT3G55370 44.330 9.13e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci857g0002 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci857g0002 - - gmx:100816635 370.933