Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci853g0001 ATGGCTATGTTTGCTTCTGCTTCTTCCCGAGTGAAATATGATGTTTTCATCAGCTTTCGAGGTTCAGACATCAGATTTGGTTTTCTCAGCCATTTGACAACGGCATTGCGTGGAAAGCAGATAGATGTCTATGTGGATGACAGGCTTGAGAGAGGGGATGAAATATCATTGGCACTTAAGGAAGCCATAGAAGGATCAATGATTGCATTGGTCATATTCTCAAAAGATTATGCTTCTTCAAAGTGGTGCTTGCAAGAGCTTGTCAAAATCATGGAATGTAAGGAAGTAAGTGGACAAATTGTGTTACCAGTTTTCTATTGTGTAGATCCTTCAGATGTCAGGCGTCAAAAACGAACTTATGCAGATGCATTTGCACATCTTGAACTGAAGTTCAAGGATAACTCAAACGAGTTGAAAAATTGGAGATCTGTCTTGAAGAAAACCGCAGACTTATCTGGTTATCATTCATCAAATTTTCAAAACGAAGCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAACTGGAAGATAACAACCCGGTTGTACCACAATATCATCTAGTTGGATTTGATCAAAATCTCGCCATTGTTGAATCATTAATGAAAATTACGTCACAAGAAGTTCGAGTTCTTGGTATTTGGGGTATTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTGTTGCTTCATAGAAAATGTGAGAGAGGAATCAACAAAGAGCAATGGTTTGTGTCATTTGCGTCAAACGCTTCTTTCTAAGCTATTAGACCAAGATGAAGATGTCCGCATAGATATGAATGGTGCAAGGAGAAGGCTGTCATGGAAAAAGGTCTTGATTGTGCTTGACGATGTGTCCGATTCAAAGCAATTAAAAGTTTTAGCTGGACAACAACTTTACTTGGGGCCTGGCAGTAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGAGTGGAGGGGTTCGTGACGAATATATACATGAAGTCAAAGAGTTGAATTTTGAAGAATCACTAAAACTTTTTTGTGTACATGCCTTCAATCAAACTCATCCCAATATTGAATATGAAGAGCTATCAAAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGGAGTTTTGGGTTCCCATTTTCATTCGAGAAATAAAAGATATTGGGGAAGTGAGCTTGACAAAATCAAAACTTATCCCCATACAGGAATACAAAGTATATTGAAGGTTAGTTATGATGGATTAGATGTCATGGATAGGGAAATATTTTTAGACATTGCATTTTTTTTCATTGGAGAAGGCAAAAATCAGGTTACTCGAGCACTAGAGGCTTGTGGTTTCAGAGCAATTAGTGGAATTGAGAATCTCATAGATAAAGCTCTCATAAAAACAAATCATGATGGGAAAATTGTAGTGCATGATTTGTTTCAAGAAATGGGTAAGCAAATAGTTCGTGAGGAATATCCAAAACATCCTGAATTACGTAGCCGATTAAATGATGCGGATGAAATTTGTGAGGTATTGCAAAGGAACAGGGGAACTGATAAAATTGAAGGCATCATATTGGATTGGAATAGAATAAATCATTTACAATTGAGCCCCAATACCTTCACAAAGATGACAAATTTAAGAATTCTCAAAATTTGTCATCGTTGGTATTCATTCAAAGAGAAAAATAATTCAGAGCTTCCTTTTGATCTTGGCTCTTTTCCTAATAAATTAAGGTGTTTTCATTGGGATCTATATCCATTGGAGTTTTTGCCATTAGAAGGCTATTGTTTCGAGAACCTTGTTATGCTATGCATGCAACATAGCAATATTAAAAAGCTTTGGGATGGACTGCAGGATCTTGTGAATTTAAAGATGTTAGATTTGAGGAGGTCCAGACAGTTGATGGAGTTGCCTGATTTCTCTAGGGCACATAATCTTGAAGAAGTATATCTGTCGGGATGTGAAAGTTTATGTAGTGTTCATCCATCTATTTTTTGTCTTCAATCTCTTGTTACATTGGATGTATCTCATTGCAAGAAAATAGAGAGTCTTGATCATGGCTCTTTTCCTAATAAATTAAGGTATTTTTCTTGGGAACAATATCCACTGGAGTCTTTGCCATTGGGCTTTTGTGCTAAGAACCTTGTCGAACTTTGTATCATGGATAGCAATATTAAAAAGCTTTGGGATGGAGTGCAGGATCTTGTGAATCTAAAGACATTATGTTTGGATCGGTGTAAACAATTGGTGGAGCTGCCTAATTTCTCTATGGCACGTAATCTTGAAGGAGTCTATCTCGGGGGTTGTGAAAGTCTACATAGTGTTCATCCATCTATTTTATCTCTCCAATCTCTTGTTGAATTGGATGTCTCTAATTGCAGGGAATTAGAGAGCCTTGAAAGTGAGACTCATTTAGAATCTCTCTCTGACCTTCATGTTCATGATTGTCAAAGCCTCAAGAAATTCTCTTTATCATCAAAGAAATTGGGAAGTTTGTGTATCGATGGGACTGGAGTTGAAATATTGCATTTTCTACCAATGGGAGGTTTCACGGAACTCAGAGATCTTGAGATTTTTAGTGAAAGATTAAGGAGCCTTCCGATAAGTGAGCTATGTGGCTTGACAAATCTTGAGGCATTTGAAATTTGGGATTTCCAGCAGGTGATTCACACAACAGAGCTGCGCTCTCTTTTTGATGCTTGGCGTAATTTAAAAATACTAAGTTTGGAAAGACGCAATTACTTGCTGGAAATCCCTGACAATATCAAGGCCTTAACAAGCTTGAAACACATTTCCTTGAGAGACTGTGAGATGCTTAAGTCTATACTTGGACTTCCTCCCTTCCTTGAAGATTTAGATGCTGAAGGATGCACTTCATTGGAGATCGTATTTTCTGACTCTCTAGTTCAAAATCCATGTCGATTTGATTTCCAGGAGTGTATAAAGTTGGATGAGTGTTCTCTTCTCTTCATTGAGAAACTAACTCATTTCTCTTTCACTTCAGCCAAGGCTAAGTGGCTTCCTAATGTTGGGGCTTGTTACGCGGGAAGCAGAGTTCCAAAATGGATGGAATATAAACATCAGACAGAGACTTCCAATGCTATCGAATTCATTTGCAATCTCGAACGATCACCCACCATCTTGGGTTGCTGCGTTGTTCCTCCTCATCTCTGCTTACCTTCCGTGCAAAGTGTCTACTGTGATTTCTCTTATGATGATAGCAACAAGTCCTGCAATTCATTTCCTTTATATTCGGGGTGTAAAATGGAGCCGTCTCATGTTTACATATGGAACCTGGAAGTGGGAAGGGAATTGAGAAGGGCTTCGTTTGGCACTGGAACAGGTAATGTTGCCAAGATTTCATGA 3396 0.3825 MAMFASASSRVKYDVFISFRGSDIRFGFLSHLTTALRGKQIDVYVDDRLERGDEISLALKEAIEGSMIALVIFSKDYASSKWCLQELVKIMECKEVSGQIVLPVFYCVDPSDVRRQKRTYADAFAHLELKFKDNSNELKNWRSVLKKTADLSGYHSSNFQNEAQLIDAIVQDVLKKLEDNNPVVPQYHLVGFDQNLAIVESLMKITSQEVRVLGIWGIGGIGKTTLARATFDKFSSQFESCCFIENVREESTKSNGLCHLRQTLLSKLLDQDEDVRIDMNGARRRLSWKKVLIVLDDVSDSKQLKVLAGQQLYLGPGSRVIVTSRDKHVFRSGGVRDEYIHEVKELNFEESLKLFCVHAFNQTHPNIEYEELSKMTVAYAKGIPLALGVLGSHFHSRNKRYWGSELDKIKTYPHTGIQSILKVSYDGLDVMDREIFLDIAFFFIGEGKNQVTRALEACGFRAISGIENLIDKALIKTNHDGKIVVHDLFQEMGKQIVREEYPKHPELRSRLNDADEICEVLQRNRGTDKIEGIILDWNRINHLQLSPNTFTKMTNLRILKICHRWYSFKEKNNSELPFDLGSFPNKLRCFHWDLYPLEFLPLEGYCFENLVMLCMQHSNIKKLWDGLQDLVNLKMLDLRRSRQLMELPDFSRAHNLEEVYLSGCESLCSVHPSIFCLQSLVTLDVSHCKKIESLDHGSFPNKLRYFSWEQYPLESLPLGFCAKNLVELCIMDSNIKKLWDGVQDLVNLKTLCLDRCKQLVELPNFSMARNLEGVYLGGCESLHSVHPSILSLQSLVELDVSNCRELESLESETHLESLSDLHVHDCQSLKKFSLSSKKLGSLCIDGTGVEILHFLPMGGFTELRDLEIFSERLRSLPISELCGLTNLEAFEIWDFQQVIHTTELRSLFDAWRNLKILSLERRNYLLEIPDNIKALTSLKHISLRDCEMLKSILGLPPFLEDLDAEGCTSLEIVFSDSLVQNPCRFDFQECIKLDECSLLFIEKLTHFSFTSAKAKWLPNVGACYAGSRVPKWMEYKHQTETSNAIEFICNLERSPTILGCCVVPPHLCLPSVQSVYCDFSYDDSNKSCNSFPLYSGCKMEPSHVYIWNLEVGRELRRASFGTGTGNVAKIS 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci853g0001 1131 Pfam TIR domain 12 180 IPR000157 GO:0007165
Prci853g0001 1131 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Prci853g0001 1131 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Prci853g0001 1131 Gene3D - 175 338 IPR027417 -
Prci853g0001 1131 Pfam NB-ARC domain 197 414 IPR002182 GO:0043531
Prci853g0001 1131 Gene3D - 9 174 IPR035897 -
Prci853g0001 1131 Gene3D - 345 429 IPR042197 -
Prci853g0001 1131 PRINTS Disease resistance protein signature 790 806 - -
Prci853g0001 1131 PRINTS Disease resistance protein signature 212 227 - -
Prci853g0001 1131 PRINTS Disease resistance protein signature 285 299 - -
Prci853g0001 1131 PRINTS Disease resistance protein signature 380 394 - -
Prci853g0001 1131 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 698 835 IPR044974 GO:0006952
Prci853g0001 1131 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Prci853g0001 1131 SMART till_3 12 151 IPR000157 GO:0007165
Prci853g0001 1131 SUPERFAMILY RNI-like 763 997 - -
Prci853g0001 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 439 IPR027417 -
Prci853g0001 1131 SUPERFAMILY L domain-like 486 826 - -
Prci853g0001 1131 Gene3D Ribonuclease Inhibitor 848 1024 IPR032675 -
Prci853g0001 1131 Gene3D Ribonuclease Inhibitor 521 699 IPR032675 -
Prci853g0001 1131 Gene3D Ribonuclease Inhibitor 700 847 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci853g0001 670 956 WRKY Transcription Factor Family AT4G12020 32.343 1.64e-21 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci853g0001 - - pcin:129298605 2263.42