Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci845g0004 ATGTTTGACTGTGGTTACAAGGCTCATTACATGGATGGTCAGCGGGAAAAATTTTTGAGGTTGGATGACTTGGACTCTAGACCATCTCCATCTTCTGATGCTGGGCTTGATGAATGTGGATTTAGTATGGTTAAATTAAGCCGTGGTGGTTATACAAGAATTGGAACCACTGGATCTTTTAAAAGAGGAATGAGAATGGGATCTGAAGGACTAAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCTAGGGCAGTCTTCCCAGAAGACCTTAAAGTATCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTATGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCTGTCTCTATTGATCCATTGTTTTTTTATCTCCCTGTGATCAATGATTCAGTTAACTGTCTTGGTATAGACCGAAAGTTGGCGATCATAGTTAGCACTATAAGAACAATCATTGATGCTTTCTATCTTATACGCATGGCTCTCCAATTTCGCACTGCTTATATAGCTCCATCGTCTCGTGTCTTTGGACGGGGTGAACTTGTTATAGATCCATCACAAATAGCCAAGCGATACATGCAGCGATATTTCATTATTGATTTCCTTTCAGTGCTGCCCTTGCCACAGATTGTAGTTTGGAGGTTTCTTCAGAGGTCAAATGGTTCGGATGTACTGTCAACAAAAGAGGCATTGCTGTTCATTATCTTGCTTCAGTATGTCCCTAGATTTCTCCGAATGGTACCATTGACTTCAGAGCTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCGTATTATTTGCTATTATACATGCTAGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGATTCATGCTGGCAGAAGGCTTGTAGTGAAAATGGGTGTAATAACAATTTCTTGTACTGTGGCAACCAACTCATGGAAGGGTATAGTGCCTGGCAAAATAGGAGCAAAGATATTCTCCATTCACAGTGCTCTGTAGATCCTGAAAACCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCTGGCATTGTTTCATCTAAGGTATTTATCTCTAAATATTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAAGGACTTCAAACCAGCACCTATGTTGGGGAGGTTGTATTTTCAATAGCGCTAGCCATTTTTGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGACGTACCTTCAGTCTCTTACCATTAGGCTTGAGGAAATGAGAGTCAAAAGACGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCATGAGCTTAGAGAGCGTGTTAGACGCTATGATCAATATAAATGGTTGGCAACACGTGGTGTAGATGAAGAAAATTTGGTGCAGAATCTACCAAAGGATCTTAGAAGAGATATTAAGCGTCATCTTTGTCTAGCTTTAGTTAGAAGGGTTCCAATATTCGAGAGTATGGATGAGAGCTTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTGTTTACGGAGAATGCTTTCATTGTCCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTCGAGAGTGTTACGACAGATGGTGGGAGAAGTGGATTTTTTAACCGCACTTTCCTTAAAGAGACAGACTTCTGTGGCGAGGAGCTTTTAACTTGGGCCTTGGATCCCAAATCTGGTTCCAACCTTCCATCTTCTACCAGAACAGTTAAGACACTTGCAGAGGTGGAGGCTTTTGCATTGATTTCTGAAGATTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGCAGGCAGGTTCAACACACCTTCCGCTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGCGGAAGATTATGGAGCTTCGTCAAAAAGAAGAATGCGAGGAATCAGGAGGAGTTCGCAACAATACCGGTGGTGGTTCATACAGTATTCGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGCGGGGTTCATCGCAGCAGGAATGCCAAGACTTCCAGAGAATTGGTGACCCTACGAAAACCACCAGAGCCTGACTTTACTGCAGATGAATGA 2193 0.4259 MFDCGYKAHYMDGQREKFLRLDDLDSRPSPSSDAGLDECGFSMVKLSRGGYTRIGTTGSFKRGMRMGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINDSVNCLGIDRKLAIIVSTIRTIIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMQRYFIIDFLSVLPLPQIVVWRFLQRSNGSDVLSTKEALLFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACSENGCNNNFLYCGNQLMEGYSAWQNRSKDILHSQCSVDPENPPFDYGIFTQAFSSGIVSSKVFISKYCYCLWWGLQNLSTLGQGLQTSTYVGEVVFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPIFESMDESLLDAICERLKPCLFTENAFIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRQKEECEESGGVRNNTGGGSYSIRATFLASRFAANALRGVHRSRNAKTSRELVTLRKPPEPDFTADE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci845g0004 730 Gene3D Helix hairpin bin 433 496 - -
Prci845g0004 730 SUPERFAMILY Voltage-gated potassium channels 100 427 - -
Prci845g0004 730 Gene3D - 111 430 - -
Prci845g0004 730 Pfam Ion transport protein 108 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci845g0004 730 FunFam Cyclic nucleotide-gated ion channel 1 503 621 - -
Prci845g0004 730 SMART cnmp_10 505 636 IPR000595 -
Prci845g0004 730 SUPERFAMILY cAMP-binding domain-like 434 624 IPR018490 -
Prci845g0004 730 CDD CAP_ED 505 636 IPR000595 -
Prci845g0004 730 Gene3D Jelly Rolls 503 623 IPR014710 -
Prci845g0004 730 ProSiteProfiles cAMP/cGMP binding motif profile. 505 589 IPR000595 -
Prci845g0004 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 726 - -
Prci845g0004 730 FunFam Cyclic nucleotide-gated ion channel 1 432 496 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci845g0004 1 730 Ion Channels AT2G23980 74.933 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci845g0004 K05391 - gmx:100820202 1229.54