Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci845g0003 ATGTTTGACTGTGGTTACAAGGCTCATTACATGGATGGTCAGCGGGAAAAATTTTTGAGGTTGGATGACTTGGACTCTAGACCATCTCCATCTTCTGATGCTGGGCTTGATGAATGTGGATTTAGTATGGTTAAATTAAGCCGTGGTGGTTATACAAGAATTGGAACCACTGGATCTTTTAAAAGAGGAATGAGAATGGGATCTGAAGGACTAAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCTAGGGCAGTCTTCCCAGAAGACCTTAAAGTATCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTATGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCTGTCTCTATTGATCCATTGTTTTTTTATCTCCCTGTGATCAATGATTCAGTTAACTGTCTTGGTATAGACCGAAAGTTGGCGATCATAGTTAGCACTATAAGAACAATCATTGATGCTTTCTATCTTATACGCATGGCTCTCCAATTTCGCACTGCTTATATAGCTCCATCGTCTCGTGTCTTTGGACGGGGTGAACTTGTTATAGATCCATCACAAATAGCCAAGCGATACATGCAGCGATATTTCATTATTGATTTCCTTTCAGTGCTGCCCTTGCCACAGATTGTAGTTTGGAGGTTTCTTCAGAGGTCAAATGGTTCGGATGTACTGTCAACAAAAGAGGCATTGCTGTTCATTATCTTGCTTCAGTATGTCCCTAGATTTCTCCGAATGGTACCATTGACTTCAGAGCTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCGTATTATTTGCTATTATACATGCTAGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGATTCATGCTGGCAGAAGGCTTGTAGTGAAAATGGGTGTAATAACAATTTCTTGTACTGTGGCAACCAACTCATGGAAGGGTATAGTGCCTGGCAAAATAGGAGCAAAGATATTCTCCATTCACAGTGCTCTGTAGATCCTGAAAACCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCTGGCATTGTTTCATCTAAGGTATTTATCTCTAAATATTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAAGGACTTCAAACCAGCACCTATGTTGGGGAGGTTGTATTTTCAATAGCGCTAGCCATTTTTGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGGTTCCAATATTCGAGAGTATGGATGAGAGCTTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTGTTTACGGAGAATGCTTTCATTGTCCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTCGAGAGTGTTACGACAGATGGTGGGAGAAGTGGATTTTTTAACCGCACTTTCCTTAAAGAGACAGACTTCTGTGGCGAGGAGCTTTTAACTTGGGCCTTGGATCCCAAATCTGGTTCCAACCTTCCATCTTCTACCAGAACAGTTAAGACACTTGCAGAGGTGGAGGCTTTTGCATTGATTTCTGAAGATTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGCAGGCAGGTTCAACACACCTTCCGCTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGCGGAAGATTATGGAGCTTCGTCAAAAAGAAGAATGCGAGGAATCAGGAGGAGTTCGCAACAATACCGGTGGTGGTTCATACAGTATTCGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGCGGGGTTCATCGCAGCAGGAATGCCAAGACTTCCAGAGAATTGGTGACCCTACGAAAACCACCAGAGCCTGACTTTACTGCAGATGAATGA 1956 0.4269 MFDCGYKAHYMDGQREKFLRLDDLDSRPSPSSDAGLDECGFSMVKLSRGGYTRIGTTGSFKRGMRMGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINDSVNCLGIDRKLAIIVSTIRTIIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMQRYFIIDFLSVLPLPQIVVWRFLQRSNGSDVLSTKEALLFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACSENGCNNNFLYCGNQLMEGYSAWQNRSKDILHSQCSVDPENPPFDYGIFTQAFSSGIVSSKVFISKYCYCLWWGLQNLSTLGQGLQTSTYVGEVVFSIALAIFGLILFALLIGNMQVPIFESMDESLLDAICERLKPCLFTENAFIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRQKEECEESGGVRNNTGGGSYSIRATFLASRFAANALRGVHRSRNAKTSRELVTLRKPPEPDFTADE 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci845g0003 651 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 424 - -
Prci845g0003 651 ProSiteProfiles cAMP/cGMP binding motif profile. 426 510 IPR000595 -
Prci845g0003 651 CDD CAP_ED 426 557 IPR000595 -
Prci845g0003 651 Gene3D Jelly Rolls 426 544 IPR014710 -
Prci845g0003 651 SUPERFAMILY Voltage-gated potassium channels 100 423 - -
Prci845g0003 651 SMART cnmp_10 426 557 IPR000595 -
Prci845g0003 651 FunFam Cyclic nucleotide-gated ion channel 1 424 542 - -
Prci845g0003 651 Pfam Ion transport protein 108 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci845g0003 651 Gene3D - 111 425 - -
Prci845g0003 651 SUPERFAMILY cAMP-binding domain-like 423 544 IPR018490 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci845g0003 423 651 Ion Channels AT2G23980 75.847 1.88e-116 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci845g0003 K05391 - gmx:100820202 679.478