Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci83g0012 ATGCCCGTTGTTTCAGACGCTTCGGCAACTGCAGAACAGATAAAATGGAGAAGACCAAGGAGTCATTTTGGTCACCTCATTCAAGAAGCAGATCCGAACCCTGCAATCCCTTCGATAATCCAGTCCACTCGCTGCAAATCAACCATTTCGTCTCTTCTTCTCTCTACTTTCTCTAACAACGCGTCGAATGAAAGTATACAGGGCAACGGCATCAACATCGGCGGCAGTGGTAGTGGCCGTGGCAAGAAGAAGAACAACTTCTCGGCCGCTGCAACCTTCAGGGGACTCGGATGCACGGCCGGTGCGTCGCAGCAGGTTTCGGTTCCGGCGGTGATTCGGACGTCGGCGGACTGGCAAGGGAAGAAGGCTAGGAAGAAGAAGCACAAAAGAAATAGCGCCAAGACCTGTCCTGGGGTTCTTGATGGTTCTGGTTCTGCTAACTGCGTTGATTTTCAAGACGTCTGGTGTGGTCCCGGCCTTGGGTTCTCAGCAGATGCTGCCGCCTCTGTTGATTGCGTCGTGGCGAGGAAGAATGTTTCTGCGAGAGGGAAGATTGATGTGGAGAGGATGACTCACAGAGAGCGTGTATCCTATCTTGGAAGACGAACAGTGAACCCAGAAACCATCTCTTTTCTGGATAATGATCCTGATATCTTCCCAACGCGCCCTCCTGCTCCTGATTCCTATGGAACTTCAAGATATTATCGTCCTGTTCGACATCCTTCGTCTGAAGGTTTTGCTGAGATAATGATGCTTCAAGGAGGTCTGCTAATGGGGGGGATAATAGATTCACATGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCTTATGAGCAACTGCTTGAGCTTGAAGAGAAAATTGGTTATGTCAACACTGGTCTTAAAGAAGACGAGATAGGATGCCACATAAGGAAAGTTCAATATCCATTTTTGAGTGAATCATTGAAGCACCATATTAACAAAAAGTGCAGCATTTGTCAGGAAGAATATGAAGGAGATGATGAGGTGGGGAAGCTAAACTGTGAACACAACTATCACTTTGAGTGCATAAGGCAATGGCTTGCACAGAAAAATTTCTGCCCAGTCTGTAAGCAAGAAGTTGTGGTTCGTCACTAG 1125 0.4729 MPVVSDASATAEQIKWRRPRSHFGHLIQEADPNPAIPSIIQSTRCKSTISSLLLSTFSNNASNESIQGNGINIGGSGSGRGKKKNNFSAAATFRGLGCTAGASQQVSVPAVIRTSADWQGKKARKKKHKRNSAKTCPGVLDGSGSANCVDFQDVWCGPGLGFSADAAASVDCVVARKNVSARGKIDVERMTHRERVSYLGRRTVNPETISFLDNDPDIFPTRPPAPDSYGTSRYYRPVRHPSSEGFAEIMMLQGGLLMGGIIDSHDQFRDWRLDVDNMSYEQLLELEEKIGYVNTGLKEDEIGCHIRKVQYPFLSESLKHHINKKCSICQEEYEGDDEVGKLNCEHNYHFECIRQWLAQKNFCPVCKQEVVVRH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci83g0012 374 FunFam E3 ubiquitin-protein ligase rnf12-A 293 372 - -
Prci83g0012 374 SUPERFAMILY RING/U-box 325 372 - -
Prci83g0012 374 SMART ring_2 326 366 IPR001841 -
Prci83g0012 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 372 IPR013083 -
Prci83g0012 374 ProSiteProfiles Zinc finger RING-type profile. 326 367 IPR001841 -
Prci83g0012 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 135 370 IPR045191 GO:0061630
Prci83g0012 374 Pfam Ring finger domain 325 367 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci83g0012 82 281 C3H Transcription Factor Family AT1G73760 44.595 2.21e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci83g0012 - - qsa:O6P43_005125 514.227