Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci833g0004 ATGGCAGCTTGCACAGTGTACACAACAACACAATCCCTCAGCACAAACTGCTGGATCTCATCTCCATCAAAATCACATTTGGGTTATTTTCCCCAGAAACAGCAGGTTGTTATCTACAGGAGGAGGAGGAGGAGGAGAAGCACCACATGTGTGATAACATGTGCAGCAGCAGGTGATCATGGTCAGACTATAGTGATTGGTCTAGCTGCAGATTCAGGCTGTGGGAAGAGTACCTTCATGAGAAGACTAACCAGTGTGTTTGGAGGAACAGCAGAACCACCAAAAGGAGGAAACCCAGATTCTAACACTCTCGTTAGTGACACCACAACAGTCATTTGCTTGGATGACTATCATTCATTAGACAGATATGGAAGAAAAGAGAAAGGAGTGACCGCACTTGATCCTAGAGCCAACAATTTTGATCTCATGTATGAGCAAGTTAAGGCTCTTAAGGATGGATTTGCTGTGGAGAAACCCATTTACAATCATGTCACTGGTCTCTTGGATCCTCCTGAGCTCATCAAGCCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATGTTTGATCCACGGGTGAGAGAACTGTTGGACTTCAGTATCTACTTGGACATCAGCAATGAAGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTCGACACACCCTTGAAAGCATCAAATCTAGCATTGAAGCTCGGAAGCCTGATTTTGAAGCCTATATTGATCCTCAGAAGCAATATGCAGATTCAGTGATAGAAGTGTTGCCAAGCCAGCTCATTCCAGATGATAATGAGGGAAAGGTTTTAAGAGTGAGGTTAATACAGAAAGAAGGGGTTAAGCATTTTAGCCCTGCTTACTTGTTTGATGAAGGGTCTACCATTTCCTGGATACCATGTGGGAGGAAGCTAACCTGCTCTTATCCTGGCATCAAATTCTTTTATGGACCTAAGACTTACTATGGTCATGAGGTATCAATTGTAGAGATGGATGGGCAATTTGACAAACTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTCTCAACAAAATTCTATGGGGAGGTTACACAACAGATGCTGAAACATGCTGACTTCCCAGGAAGCAACAATGGGACAGGTCTTTTCCAGACCATAATTGGGTTGAAGATTAGAGATTTATATGAGCAAATAATAGCCAGCAGGGCTAAGGCTCCAGTAGGAGCAGCAAAAGCCTAG 1230 0.4341 MAACTVYTTTQSLSTNCWISSPSKSHLGYFPQKQQVVIYRRRRRRRSTTCVITCAAAGDHGQTIVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLVSDTTTVICLDDYHSLDRYGRKEKGVTALDPRANNFDLMYEQVKALKDGFAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERRHTLESIKSSIEARKPDFEAYIDPQKQYADSVIEVLPSQLIPDDNEGKVLRVRLIQKEGVKHFSPAYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPKTYYGHEVSIVEMDGQFDKLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIIGLKIRDLYEQIIASRAKAPVGAAKA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci833g0004 409 PRINTS Phosphoribulokinase family signature 232 255 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci833g0004 409 PRINTS Phosphoribulokinase family signature 179 197 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci833g0004 409 PRINTS Phosphoribulokinase family signature 214 231 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci833g0004 409 PRINTS Phosphoribulokinase family signature 70 87 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci833g0004 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 333 IPR027417 -
Prci833g0004 409 PANTHER URIDINE KINASE 63 313 - -
Prci833g0004 409 FunFam Phosphoribulokinase 60 290 - -
Prci833g0004 409 Pfam Phosphoribulokinase / Uridine kinase family 65 263 IPR006083 GO:0005524|GO:0016301
Prci833g0004 409 Gene3D - 60 293 IPR027417 -
Prci833g0004 409 CDD PRK 65 354 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci833g0004 55 255 PRT Gene Family AT1G55810 26.570 1.17e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci833g0004 K00855 - gmx:100777515 705.671