Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci821g0001 ATGACTTCCATTCAGGAAGACACTGAAGATTATTTCAACATCGATTTCAGAGTTATTTCTCATGCAACTTCACCTGAGACGGGGCTTCATGAATCAACATCGTTTCCCGTGTTTGAATCACCTTTCTTGATGCCATGCGAGGAATTACTCCAAGATGTTCCCGGATTTCTTCGCAGAAATTTAGCCAATTATCTCAATGAGCCAGACTTTCATCTGCTAGCTTCTCAAATCATATCTTACTATCAAGAGGCACTCCAATATACTATCTTTCAAGCTGCCAATTCTCGTATAATACCTTTAAATCTTGATATATTATTACCCTCTCAATACGAAGCAAATCAAGATTTGATTGAGATTGGTGACGATGATCCTGAGTTGATGGAAGTGTATCAAGCTATAGAGCAATCCATGCAACAATTATCTACAAGACCAACTTCAAATAAGGCAATAGCATCGCTCAAGAAATTGAAAATTTCCAGAGACGAAATGAAGGCAGACTTGTGCAGCATTTGCTTAGAAAATTTTGAAGACGACGAAGATGCCTCAGCAATGCCATGCAACCATATTTATCACCGTGATTGTATTGTAACATGGCTGAAAACAAATCACACATGTCCATTGTGTCGCTTTCAAATGCCTGTGGAATGA 648 0.3858 MTSIQEDTEDYFNIDFRVISHATSPETGLHESTSFPVFESPFLMPCEELLQDVPGFLRRNLANYLNEPDFHLLASQIISYYQEALQYTIFQAANSRIIPLNLDILLPSQYEANQDLIEIGDDDPELMEVYQAIEQSMQQLSTRPTSNKAIASLKKLKISRDEMKADLCSICLENFEDDEDASAMPCNHIYHRDCIVTWLKTNHTCPLCRFQMPVE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci821g0001 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
Prci821g0001 215 SUPERFAMILY RING/U-box 159 213 - -
Prci821g0001 215 ProSiteProfiles Zinc finger RING-type profile. 168 209 IPR001841 -
Prci821g0001 215 SMART ring_2 168 208 IPR001841 -
Prci821g0001 215 CDD RING-H2_PA-TM-RING 168 209 - -
Prci821g0001 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 97 213 - -
Prci821g0001 215 Pfam Ring finger domain 167 209 IPR001841 -
Prci821g0001 215 SMART ringv_2 167 209 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci821g0001 128 215 C3H Transcription Factor Family AT1G18760 34.066 3.90e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci821g0001 - K11982 pcin:129298487 441.039