Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci814g0006 ATGCCTTGTGGAGAACTAATTCGAGATGTTCCAGGATTTCTCCGTACAAACGTAGCCAACTATCTCTCTGAAAATGATTTCGAGTCATTGGCATCTAAAATCACATCTTACTACCAAGAAGTAATCCAACATACCACCATTGAAGCTGCTCAACATCTCTTAATACCTCTCATCGTGTATTTTCATGTTCATGTTGATCCCACTGATCATGGCTTAGCACCTATGTTTTTTCATCTTCAACTTCCTTACGACGAATATGCGATGGATATTGATTATATTCGTTATTCAACAAGAACGGATCATTTTATAGAGCATCAATTCGTTCAAGAATCTTCTTATCATCAGCAACTTGCCACTTTTGCTGAATATAATCAAAATTTACACGTTATTAGTGATGATGATGATGATGATGATGATGTGGAGTCACGGCAAGTCAATGAAGCCATAGAACAATCCATGCAACACTTGTTTATGGTTCCGGCAACAGAAAAGGCTCTAACATCACTGAAGAAGATGAAGATGTCTAGCAACGAAGCAAAGGCAAGCCAATGTAGCATTTGCTTGGAAAATTTTGATGATGATGGCGGCGGCGACGATGGTGTTGATGCTTCAGCATTGCCTTGTGACCATATTTTTCACAATAATTGCATTGTAAAATGGCTAAAAACTGGTCATACTTGCCCATTATGTCGCTTTCAATTGCCTATTGAGTAA 714 0.3838 MPCGELIRDVPGFLRTNVANYLSENDFESLASKITSYYQEVIQHTTIEAAQHLLIPLIVYFHVHVDPTDHGLAPMFFHLQLPYDEYAMDIDYIRYSTRTDHFIEHQFVQESSYHQQLATFAEYNQNLHVISDDDDDDDDVESRQVNEAIEQSMQHLFMVPATEKALTSLKKMKMSSNEAKASQCSICLENFDDDGGGDDGVDASALPCDHIFHNNCIVKWLKTGHTCPLCRFQLPIE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci814g0006 237 ProSiteProfiles Zinc finger RING-type profile. 184 231 IPR001841 -
Prci814g0006 237 SMART ringv_2 183 231 IPR011016 GO:0008270
Prci814g0006 237 Pfam Ring finger domain 183 231 IPR001841 -
Prci814g0006 237 SMART ring_2 184 230 IPR001841 -
Prci814g0006 237 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 123 235 - -
Prci814g0006 237 CDD RING-H2_PA-TM-RING 183 231 - -
Prci814g0006 237 SUPERFAMILY RING/U-box 183 235 - -
Prci814g0006 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 236 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci814g0006 144 237 C3H Transcription Factor Family AT1G18760 35.052 1.37e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci814g0006 - - pcin:129298469 476.863