Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci812g0001 ATGAGTTCCGCCTCTGCTTCTGAAGCCGCCGCCGCCGCCTCCAACTCCTCCACGGAGTCCCTGAACGGCTTGAAGTTCGGTCAGAAGATATACTTCGAGGATGTGGGTGTGGGAGGTCCTGTGAAATCCAGCGGTGGGGCGTCGGCGTCCTCCGCAGGGGTGACCCCGCCTAAGAAGGGAAGGGGGAGTGGGGCTCAGGGGGCTCAGCCTCCGAGGTGTCAGGTGGAGGGCTGCAAAGTAGATCTGAGTGATGCCAAGGCTTACTATTCCAGACATAAAGTCTGTAGTGTGCACTCCAAATCACCCAAGGTCGTTGTCGCTGGTCAAGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCACCAGCTCTCTGAATTTGATCAAGTAAAGCGAAGCTGTCGCAGGCGACTTGCTGGTCATAACGAAAGGAGGAGAAAACCCCCACCTGGCTCCCTGATGGCTTCTCGATATGGCCGACTTGCTCCAGCTAGTTTTGATAACAACAATAGCAGAGGTGGTGGATTTCTAATGGAATTCGCTTCATATCCTAAACTTAGCCTAAGAAATTCGATGCCAACACCAACATCATCTGAGCAGCTTCCTGGGAATCCAACAGTGACACTTCCATGGCAGGGCCATTCAGAGTCTCCATCATTGCTTTTCTTGCAAGCAGGTTCTCCAGTTGGCGGGACAAGCTACTCTGGCTCCAGAAATTCTTCATCAGGGGAAAGCTTTTCAGGATTGACAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAACCAAGCTTGGGCCCCTCGAAACAGAGCACCAAGTCTTGGTACAAATAATTTTATGAGCTTTGACGACACGCCCATCACACAACTCCCTGCATCTTCTCATCATGGACATGGAACTTCCCTCCATCATCAACTTTCAAATGCCTCATGGTGTTTTAAGGGCATTGATGCTGCTGCTGCTGATAGCTGTTCTCATGACATTGTCCCTGACTTGGGCCTGGGTCACCAAATTTCGCAGCCTATCAGCAGCCCTCTTCCTGGGGAGCTTGACGTGTCACAACAGGGCAGGAGGCATTACATGGATCTAGAGCAGTCGAGGGTCTATGGTGATTCTCAGCATCACATGCACTGGTCTCTCTAG 1137 0.5154 MSSASASEAAAAASNSSTESLNGLKFGQKIYFEDVGVGGPVKSSGGASASSAGVTPPKKGRGSGAQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCSVHSKSPKVVVAGQEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKPPPGSLMASRYGRLAPASFDNNNSRGGGFLMEFASYPKLSLRNSMPTPTSSEQLPGNPTVTLPWQGHSESPSLLFLQAGSPVGGTSYSGSRNSSSGESFSGLTDSSCALSLLSNQAWAPRNRAPSLGTNNFMSFDDTPITQLPASSHHGHGTSLHHQLSNASWCFKGIDAAAADSCSHDIVPDLGLGHQISQPISSPLPGELDVSQQGRRHYMDLEQSRVYGDSQHHMHWSL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci812g0001 378 FunFam Squamosa promoter-binding-like protein 14 64 134 - -
Prci812g0001 378 ProSiteProfiles Zinc finger SBP-type profile. 70 147 IPR004333 GO:0003677
Prci812g0001 378 MobiDBLite consensus disorder prediction 1 20 - -
Prci812g0001 378 Pfam SBP domain 73 146 IPR004333 GO:0003677
Prci812g0001 378 MobiDBLite consensus disorder prediction 137 156 - -
Prci812g0001 378 SUPERFAMILY SBT domain 71 152 IPR036893 GO:0003677|GO:0005634
Prci812g0001 378 MobiDBLite consensus disorder prediction 42 72 - -
Prci812g0001 378 Gene3D - 63 134 IPR036893 GO:0003677|GO:0005634
Prci812g0001 378 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 4 342 IPR044817 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci812g0001 24 378 SBP-box Gene Family AT2G42200 43.351 7.27e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci812g0001 SBP 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci812g0001 - - pcin:129298462 692.96