Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci811g0001 ATGCGGCTACTTGCCGCCTCTTTAGTTCCTCATCACTTGTTTTCGAGAAATGACCATTCCCGCGGCGGTGGCAGCGGTGCCGGAGGTGGTGGCCGTGGCGGTGGTTCTTATGGCACTTCTTCTTCAGCATCTGAATTAGCTCCTCATGATCTCTCTTCTACTTCATCAGAAAGCTGGCACCACCACCACCACCAGATGAATTTCTCTTCTGTGATAATGGAAGATTCTCTCAGAGCCACCAACTTTTTTGGCGACCCGTTCTCGAACATGCGAGATCCCTTTCTTCAAGACCTTGATTTCCCCTTACCTTCTTCCTACTTCAGTTCTGCAATTAATAATTCTGCCATGGAAGATGCATCGCCTGGTTTTTCTGATTCTTCTGTTGTTTTGTCGTCTCATCACAAGCTTGTAGAAGATGATATGAGAATAAGGCCCCCTGTAGCAGCAGCAGCTTGTAACAACAACACCATATTCTCCAACATGATTCAGATCTCTCCCAACATATTCGCCGCCGCCGCCATAAATTCTTCATCTTCGTCATCCTTGCCGCTGTCGTCGCCACGGGGAATCGAGCCTTCTTCTTCTTCTTCTTCTTCTTTGGTTTCTGCTGGCAACTTGAATATCACGGTGGACAACGCATCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAAAGCCAGGCGAAGAAGGTGGTGTGTATACCTGCACCAGCAGCGGCAAATAGCAGACCAAGTAGTGGAGAGGTAGTTCCGTCTGATCTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCATACCCAAGGGGCTACTATAGATGCAGCAGCTCCAAGGGTTGTTCAGCGAGGAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGCAACGCTCTCGCCGGCTCAACCAGGTCTCAGCCTTCCAAGAACAACAACAACGCTTCCAAGAACAACAGCGTCAACAATTCTGATCAAGCTTCGACGAAGCCGAAGGAGGAAGAGGAGCAGCAGCAGCAGCAAGATCATCATCAGAGAGGGAAAAGCTCATCATCATCAGTGAAGGAGGAGATGGAGATGGAAGATATAGCAGTGATGAACCAGAATGATCAAAATAATAGATCAGAAGGAGTGGGATACAAACCATGTATGTTGGAGAGTAATAATAATAATAATCAGTCTTGTGAGGATTTCTTTGCAGAACTGGGAGAGATTGAAGCTGACCCACTCAATCTCTTGTTCACTCAAGCAGGTTTCAATGAAGAGCATCAGAATCATGACCGTCAGAGAGAATCCAAAGCTTTAGATCCTTTTCATCTCTTTGACTGGTCATCATCATCATCAGCATCAGCAGATATTCACAGCACCACCACCACCTCATTTGAAGAACCAAAGAGAGGGTTATAA 1473 0.4718 MRLLAASLVPHHLFSRNDHSRGGGSGAGGGGRGGGSYGTSSSASELAPHDLSSTSSESWHHHHHQMNFSSVIMEDSLRATNFFGDPFSNMRDPFLQDLDFPLPSSYFSSAINNSAMEDASPGFSDSSVVLSSHHKLVEDDMRIRPPVAAAACNNNTIFSNMIQISPNIFAAAAINSSSSSSLPLSSPRGIEPSSSSSSSLVSAGNLNITVDNASVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNASKNNSVNNSDQASTKPKEEEEQQQQQDHHQRGKSSSSSVKEEMEMEDIAVMNQNDQNNRSEGVGYKPCMLESNNNNNQSCEDFFAELGEIEADPLNLLFTQAGFNEEHQNHDRQRESKALDPFHLFDWSSSSSASADIHSTTTTSFEEPKRGL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci811g0001 490 ProSiteProfiles WRKY domain profile. 250 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci811g0001 490 MobiDBLite consensus disorder prediction 182 201 - -
Prci811g0001 490 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci811g0001 490 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 152 436 IPR044810 GO:0003700
Prci811g0001 490 MobiDBLite consensus disorder prediction 467 490 - -
Prci811g0001 490 MobiDBLite consensus disorder prediction 350 380 - -
Prci811g0001 490 MobiDBLite consensus disorder prediction 299 349 - -
Prci811g0001 490 SUPERFAMILY WRKY DNA-binding domain 253 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci811g0001 490 MobiDBLite consensus disorder prediction 280 380 - -
Prci811g0001 490 MobiDBLite consensus disorder prediction 35 54 - -
Prci811g0001 490 Gene3D WRKY domain 228 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci811g0001 490 Pfam WRKY DNA -binding domain 257 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci811g0001 490 MobiDBLite consensus disorder prediction 15 58 - -
Prci811g0001 490 FunFam probable WRKY transcription factor 14 228 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci811g0001 81 439 WRKY Transcription Factor Family AT2G34830 45.619 5.52e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci811g0001 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci811g0001 - - pcin:129305007 772.696