Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2730 ATGCCTCTTCCGAATAAATCAATCAAGGCTGCTCAGGAAGGCGGTGGCACCTTCAAGGATTTCGAAGATCCTGAGACCCCTTCCAACAATTTATGGGTTGGCAATTTATCGCACGAGGTTACCGAGTCAGATCTTATGGCTCTCTTTGCCCAGTACGGCGCTCTTGATAGCGTCACCTCGTATTCCTCTCGGAGTTACGGCTTTGTGTTTTTCAAGCGCGTCGAGGATGCAAAGGCTGCCAAGAACGCGTTACAAGGCACCCTTCTGCGCGGAATTCCTATGAAGATTGAGTTTGCGAGACCGGCAAAGCCATGTAAACAACTTTGGGTGGGTGGTATTAGCCCAGCTGTTACAAAGGAAGAACTGGAGGCTGAGTTCCGCAAATTTGATGATGCAACTCATGCCATGAAAATGATGAATGGAAAGCGTATTGGTGGCGACCAAATTCGTGTAGATTTCCTTCGATCACAATCCTCAAAAAAGGATATGTTGCTTGAGTATGGACAGTTTCAGGGAAAAATCATGGGCCCTCCTGATTTCTACTCTGGTCAGAAAAGGCCACTGCAAACACAACCTTCAGTTGTGAGGAAGGGAGATGGTCAACCCAGCAATATTTTGTGGATAGGTTATCCTCCTTCTCTTCAGATTGATGAGCAAATGCTCCACAATGCCATGATTTTATTCGGTGAAATTGAGAGAATCAAGAGCTTTCCTTCCAGGCACTACTCATTTGTGGAATTCAGGAGTGTGGATGAAGCTCGACGTGCCAAAGAGGGTCTTCAAGGTCGACTCTTCAATGATCCTCGGATTACTATAATGTATTCAAGCAGTGAGTTGGCACCTGGCAAAGATTACCCTGCCATTTTCACTGGAAGCAAAGGACCAAAACCTGACATCTTCCTAACTGAGCAAACATTTCGACCATTACAGATGGATGTGTTTGGCCACAATCGTCCAATGGTTCCAAATAATTTTCCACCTGGTGTTATTGTTGGGCCAAACGTACCATTGAGACCTTTTGGTGCTCAAGGTAGCCTTGAACCTTTGCTTTCAGGCAGTGAATTTAATGAATTGGGCACAAACCAAAAGTTTCAGGATGGTAGCTCCAAAAGTCAAATGGGTCCAAATTGGAATCGGCCATCTCCTCCTGCAGCAGGGATGCTCCATTCTGCACCGGGTATTAGACCTCCAACTAGATCCACATCTAGCGCATGGGATGTGCTTGACATAAACCAATTTCAGAGGGATTCTAAGCGTTCAAGGATAGATGGTGCTTTATCTGTTGATGATGCTCCCTTTCCTTTAAGGAATGTTGATGATCGTGCAGTAGGGTTAGAGCAATCTTATGGGATGGAGCCAGTTATTGATGGTGGTTCTGGTCCATTTGTAAACATCCAAGGGAAGGCTCACCCTGGTCCAGTGGGCACAAGGATCTCAACTGGAGTGCTTGCTCCTGTTCAACTTGATATTGATCACATATGGCGTGGGATAATTGCAAAAGGGGGGACACCAGTTTGTCAAGCAAGATGTGTCCCTCTAGGAAAAGGGATAGGGACTGAGCTTCCAGAAGTTGTTGATTGCTCAGCCAGGACTGGATTGGATATGCTAACAAAACATTATGCAGATGCTGTTGGTTTTGATATTGTCTTCTTTCTACCTGATAGTGAAGATGACTTTGCATCATACACTGAATTTCTTCGCTACCTTGGTGCTAAAAACCGAGCTGGTGTTGCCAAATTTGTTGATGGGACTACTCTCTTCTTGGTGCCTCCATCTGATTTCTTAACGAAAGTTTTAAAAGTTGCTGGGCCTGAACGTCTATATGGTGTGGTTCTTAAGTTTCCGTCTATGCCAAGTGGTACGTCAATGCAACAGCCATTGCCCTTGTCTGTACCTTCAACTCAGTATATTGATAAGCAGCAGGTTCCTCCTTCTCAAGTAGAGTATGGTCAGAAACCTGCAAAGGAGGAAGAACTTTTGCCTATGGATTATAATAGATTGTTGCATGATGAGTCTAAAGTTCCTTCAAAACCACTTTATCCAGCTACAAGTGGCGCCTCTTTAGTCCAGTCTGTACCCTCAGATTATACTTCTAGCAATACTGCTGCAGCAACCCAACCTGGAGTTACATTAACACCTGAGCTTATTGCCACTCTGGCGACTTTGCTTCCTGGAACTACACAATCATCTGCCACTGATGGTGCCAAGTCAGCAGTAGGCTCCTCAACTATGAAAGCTCCATTCCCTCCGGTTGTGCCTAATGATGGAAACCAATCTCATGTCTGGAAACAGGACCATCAAATTGCAGATCCATCCAGTCATGTCCTTCAACAGGCAGGGAGTACGTACTATCAACCTTATCCATTATCATCTACTTATGGCCACCCTGGTCAAGTGGTCACTGGCAGTTCAAATGTCCAAGATTCTGCTGCCAGCTTACAGCAGCACGTTGCTATCTCATCTAGACCCATGACTAACTTCTTGATGCCTTCTCAAAGCGGACATGTAACTTTATCCCTCCCAATGAATCAATCATATCAAGTTGAAGCCTCCTCCAGCTCTCAGAAAGGTTATGGAGTGGTGCATGGAATAGATGCCTCTGTTTTATATAGTTCTCAGGCTCCTCAGAATCCTAATATTTCTATTTCCTCGTCCAATCAAGTTCATGGTGCTAACCCTTCTCAGCAACAAACTGCTATGCTATATTCAGCAGACAAAGGAAACACAGAGCCTCCAAGTCAGCAATTTCAATCTGCTCTCCAAGGAGGCAGTCAGGGCACATCATCAGAAGTGGAGGCAGATAAAAACCAGAGGTACCAGTCAACACTACAGTTTGCTGCGAGTCTTCTCCTCCAAATACAGCAGCAGCAGCAGCAGCAAACCCAAGGAGGGCGTGGGGCTGGAAATCAACAATGA 2916 0.4537 MPLPNKSIKAAQEGGGTFKDFEDPETPSNNLWVGNLSHEVTESDLMALFAQYGALDSVTSYSSRSYGFVFFKRVEDAKAAKNALQGTLLRGIPMKIEFARPAKPCKQLWVGGISPAVTKEELEAEFRKFDDATHAMKMMNGKRIGGDQIRVDFLRSQSSKKDMLLEYGQFQGKIMGPPDFYSGQKRPLQTQPSVVRKGDGQPSNILWIGYPPSLQIDEQMLHNAMILFGEIERIKSFPSRHYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSELAPGKDYPAIFTGSKGPKPDIFLTEQTFRPLQMDVFGHNRPMVPNNFPPGVIVGPNVPLRPFGAQGSLEPLLSGSEFNELGTNQKFQDGSSKSQMGPNWNRPSPPAAGMLHSAPGIRPPTRSTSSAWDVLDINQFQRDSKRSRIDGALSVDDAPFPLRNVDDRAVGLEQSYGMEPVIDGGSGPFVNIQGKAHPGPVGTRISTGVLAPVQLDIDHIWRGIIAKGGTPVCQARCVPLGKGIGTELPEVVDCSARTGLDMLTKHYADAVGFDIVFFLPDSEDDFASYTEFLRYLGAKNRAGVAKFVDGTTLFLVPPSDFLTKVLKVAGPERLYGVVLKFPSMPSGTSMQQPLPLSVPSTQYIDKQQVPPSQVEYGQKPAKEEELLPMDYNRLLHDESKVPSKPLYPATSGASLVQSVPSDYTSSNTAAATQPGVTLTPELIATLATLLPGTTQSSATDGAKSAVGSSTMKAPFPPVVPNDGNQSHVWKQDHQIADPSSHVLQQAGSTYYQPYPLSSTYGHPGQVVTGSSNVQDSAASLQQHVAISSRPMTNFLMPSQSGHVTLSLPMNQSYQVEASSSSQKGYGVVHGIDASVLYSSQAPQNPNISISSSNQVHGANPSQQQTAMLYSADKGNTEPPSQQFQSALQGGSQGTSSEVEADKNQRYQSTLQFAASLLLQIQQQQQQQTQGGRGAGNQQ 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2730 971 MobiDBLite consensus disorder prediction 359 378 - -
Prci7g2730 971 SUPERFAMILY RNA-binding domain, RBD 26 159 IPR035979 GO:0003676
Prci7g2730 971 SMART rrm1_1 30 97 IPR000504 GO:0003723
Prci7g2730 971 SMART rrm1_1 107 152 IPR000504 GO:0003723
Prci7g2730 971 SMART rrm1_1 205 273 IPR000504 GO:0003723
Prci7g2730 971 SUPERFAMILY RNA-binding domain, RBD 188 277 IPR035979 GO:0003676
Prci7g2730 971 MobiDBLite consensus disorder prediction 904 937 - -
Prci7g2730 971 Pfam SPOC domain 489 605 IPR012921 -
Prci7g2730 971 CDD RRM_SF 108 152 - -
Prci7g2730 971 PANTHER RNA RECOGNITION MOTIF-CONTAINING 21 129 - -
Prci7g2730 971 Gene3D - 5 107 IPR012677 -
Prci7g2730 971 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 101 IPR000504 GO:0003723
Prci7g2730 971 MobiDBLite consensus disorder prediction 1 26 - -
Prci7g2730 971 MobiDBLite consensus disorder prediction 727 748 - -
Prci7g2730 971 FunFam Flowering time control protein FPA 21 103 - -
Prci7g2730 971 CDD RRM_SF 31 97 - -
Prci7g2730 971 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 216 270 IPR000504 GO:0003723
Prci7g2730 971 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 91 IPR000504 GO:0003723
Prci7g2730 971 MobiDBLite consensus disorder prediction 359 403 - -
Prci7g2730 971 CDD SPOC_FPA-like 493 613 - -
Prci7g2730 971 FunFam flowering time control protein FPA 197 291 - -
Prci7g2730 971 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 204 277 IPR000504 GO:0003723
Prci7g2730 971 Gene3D - 193 281 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2730 Prci-Chr7 39018353 39034113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2730 4 267 Eukaryotic Initiation Factors Gene Family AT4G34110 23.958 6.36e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2730 7 39018353 39034113 Prci7g2730 7 39018353 39034113 ECH