Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2703 ATGTTCAATCGGTCATCCAGCCCCGAAACCGAGCGAGTTTTTTCGCGCCTTATCCGTAGCTTTGCTGAGGACCCCCCTCCTCAGAATCTCCCGCCCCTCGCCGTAAAGCAAGAGGTCAGCCAGAACCAGCAGCCTCAGCCTCAGGCTGTGCCGCCTGTCAATAATGAAGCCGCGGTTCTGCCGCGGCAGCAGAACAGCACGAACATTTTCGACGGTGCGCCCTGCAATTTATACCCGAGCTCAGCGCGACCCCCTCTGCCAAATCAGGGCCTCTCTTCGGTTAATCGGCTGCCCCCTATGAAGACTGGAATCGGAAACAGTACTTGTAACCTTACCAGGCATAATAGCTCGCCCCCAGGACTCTTGGCTAACTTCAACATTGATCCTGGCTATGCTGCGGCTGTGAGAGGCATGGGGACTTTTGCAGCTGGAGATATAGCCACCGAAGCGACAAGCTTTCCTTCTGCAGAGACGTTGAAGAACCGACCACCGGCTTACCTGTCGGGGTTAATGTCATCCATACCTGAGATCGGAGATAAAAACAACATGGAGCTAGTTAATCCCCAGAAGGAGGCCTTTAGTGAAAGTCAGGGTAATGATTTTATGTCTGGCTTCCCCGTAGATCCTTGGGACGATTCTGCAATCATGTCTGACAATATCAGCGGTCTAAAAAGATACGGAGATGATGAGGATGATACAAAACCATTGTCCGGCTTAAGTGCGGCTGAAGCCAAGAATGAGAGGGGAAGCGTGGGCGGTGGTCCTTCTCCCTTGACTCATCACTTGAGTTTGCCAAAAACTGCAATGGAGATGGCGGCCGTTGAGAAGTTATTGCAGTACTCGGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGTGGCTGTGCCACTCACCCCCGAAGCATTGCAGAGCGGGTTCGAAGAACTAAAATTAGTGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCGACTACATTAAAGACCTTCAAAAGCTGGTCCAGACACTTTCAGACAGCCAATCTAGGTGTACGTGTTTACGGAGGCAGCACCAATAA 1101 0.5141 MFNRSSSPETERVFSRLIRSFAEDPPPQNLPPLAVKQEVSQNQQPQPQAVPPVNNEAAVLPRQQNSTNIFDGAPCNLYPSSARPPLPNQGLSSVNRLPPMKTGIGNSTCNLTRHNSSPPGLLANFNIDPGYAAAVRGMGTFAAGDIATEATSFPSAETLKNRPPAYLSGLMSSIPEIGDKNNMELVNPQKEAFSESQGNDFMSGFPVDPWDDSAIMSDNISGLKRYGDDEDDTKPLSGLSAAEAKNERGSVGGGPSPLTHHLSLPKTAMEMAAVEKLLQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKLVQTLSDSQSRCTCLRRQHQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2703 366 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 358 - -
Prci7g2703 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 294 344 IPR011598 GO:0046983
Prci7g2703 366 FunFam Transcription factor bHLH130 family 295 364 - -
Prci7g2703 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 297 358 IPR036638 GO:0046983
Prci7g2703 366 MobiDBLite consensus disorder prediction 242 262 - -
Prci7g2703 366 MobiDBLite consensus disorder prediction 34 51 - -
Prci7g2703 366 SMART finulus 300 350 IPR011598 GO:0046983
Prci7g2703 366 Gene3D - 295 365 IPR036638 GO:0046983
Prci7g2703 366 MobiDBLite consensus disorder prediction 20 56 - -
Prci7g2703 366 Pfam Helix-loop-helix DNA-binding domain 299 345 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2703 Prci-Chr7 38771038 38773417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2703 110 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 45.703 1.38e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g2703 HLH 4.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2703 - - pcin:129315911 715.687