Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2702 ATGTTCAATCGGTCATCCAGCCCCGAAACCGAGCGAGTTTTTTCGCGCCTTATCCGTAGCTTTGCTGAGGACCCCCCTCCTCAGAATCTCCCGCCCCTCGCCGTAAAGCAAGAGGTCAGCCAGAACCAGCAGCCTCAGCCTCAGGCTGTGCCGCCTGTCAATAATGAAGCCGCGGTTCTGCCGCGGCAGCAGAACAGCACGAACATTTTCGACGGTGCGCCCTGCAATTTATACCCGAGCTCAGCGCGACCCCCTCTGCCAAATCAGGGCCTCTCTTCGGTTAATCGGCTGCCCCCTATGAAGACTGGAATCGGAAACAGTACTTGTAACCTTACCAGGCATAATAGCTCGCCCCCAGGACTCTTGGCTAACTTCAACATTGATCCTGTATCTGCAGGCTATGCTGCGGCTGTGAGAGGCATGGGGACTTTTGCAGCTGGAGATATAGCCACCGAAGCGACAAGCTTTCCTTCTGCAGAGACGTTGAAGAACCGACCACCGGCTTACCTGTCGGGGTTAATGTCATCCATACCTGAGATCGGAGATAAAAACAACATGGAGCTAGTTAATCCCCAGAAGGAGGCCTTTAGTGAAAGTCAGGGTAATGATTTTATGTCTGGCTTCCCCGTAGATCCTTGGGACGATTCTGCAATCATGTCTGACAATATCAGCGGTCTAAAAAGATACGGAGATGATGAGGATGATACAAAACCATTGTCCGGCTTAAGTGCGGCTGAAGCCAAGAATGAGAGGGGAAGCGTGGGCGGTGGTCCTTCTCCCTTGACTCATCACTTGAGTTTGCCAAAAACTGCAATGGAGATGGCGGCCGTTGAGAAGTTATTGCAGTACTCGGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGTGGCTGTGCCACTCACCCCCGAAGCATTGCAGAGCGGGTTCGAAGAACTAAAATTAGTGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCGACTACATTAAAGACCTTCAAAAGCTGGTCCAGACACTTTCAGACAGCCAATCTAGGTGTACGTGTTTACGGAGGCAGCACCAATAA 1110 0.5135 MFNRSSSPETERVFSRLIRSFAEDPPPQNLPPLAVKQEVSQNQQPQPQAVPPVNNEAAVLPRQQNSTNIFDGAPCNLYPSSARPPLPNQGLSSVNRLPPMKTGIGNSTCNLTRHNSSPPGLLANFNIDPVSAGYAAAVRGMGTFAAGDIATEATSFPSAETLKNRPPAYLSGLMSSIPEIGDKNNMELVNPQKEAFSESQGNDFMSGFPVDPWDDSAIMSDNISGLKRYGDDEDDTKPLSGLSAAEAKNERGSVGGGPSPLTHHLSLPKTAMEMAAVEKLLQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKLVQTLSDSQSRCTCLRRQHQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2702 369 Coils Coil 361 369 - -
Prci7g2702 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 300 361 IPR036638 GO:0046983
Prci7g2702 369 MobiDBLite consensus disorder prediction 34 51 - -
Prci7g2702 369 FunFam Transcription factor bHLH130 family 298 367 - -
Prci7g2702 369 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 361 - -
Prci7g2702 369 MobiDBLite consensus disorder prediction 20 56 - -
Prci7g2702 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 297 347 IPR011598 GO:0046983
Prci7g2702 369 MobiDBLite consensus disorder prediction 245 265 - -
Prci7g2702 369 Pfam Helix-loop-helix DNA-binding domain 302 348 IPR011598 GO:0046983
Prci7g2702 369 Gene3D - 298 368 IPR036638 GO:0046983
Prci7g2702 369 SMART finulus 303 353 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2702 Prci-Chr7 38770914 38773417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2702 110 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 45.174 1.30e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g2702 HLH 4.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2702 - - pcin:129315911 725.702