Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2701 ATGGATTCAGCAACTCCACCGTCGCCGGAGCTGAGGCTAGACGAGTTAAGAGCACTCAAGGTCCTGGGTAAGGGTGCCATGGGTACCGTCTTCCTCGTCAATGACGTCGTTGCCGATCCTTCTGCTCGCTGCCCCTTCGCCCTCAAGGTCGTCGAGAAATCCTCTGTCCACAACAAGCTCGACACCGACCGTCGTGCCCGCTGGGAAATCCATGTCCTCTCTCGCTTGACTCACCCGTTTCTTCCTTCCCTTTTAGGGACATTTGAGAACCATCAATTCTTGGCCTGGGCCATCCCTTTTTGTCCGGGCGGCGACCTCAACGTCCTCCGTTACCGTCAAACTGATCGGGTGTTCGCCCCTGCCGTCATTCGCTTCTATTTGGCAGAGATCATCTGCGCATTAGAGCATCTTCACGCACAGGGCATCGCCTATCGTGATTTGAAGCCGGAAAACGTCCTCGTCCAGCAGTCCGGTCACGTGACCCTGACGGACTTCGATCTGTCTCGAAATCTCGCCCCCAAAACTATCAAAAATGCCATCACCGTCGAACAAAATCTGTCCGACAACCGAGGCAAGCATCGCCGGAATTTCACGCGTTGGATTCCAGTCCCACAGGATATTATTCATATCAAAAGAGGATTGAAGAAGGCCAAGTCCGCCAGAGTCATCCCGGTGAGCAGGAGGAAAGCGAGTTTCTCCAACGGGGAGCGTTCTAACTCGTTCGTTGGCACCGAAGAATACGTTTCGCCCGAGGTTGTCCGCGGCGAGGGACACGGGTTCGCCGTCGACTGGTGGGCCCTGGGCATATTGACGTACGAGATGTTATACGGCACGACGCCGTTCAAGGGAAGGAATCGGAAAGAAACGTTCTGCAACGTTGTGACGAAAGCGCCTGAATTCGCAGGGAAGCGAACGACCTTAACAGACCTGATAGAACGGTTGCTGCAGAAAGACCCCACAAAGCGATTGGGTTACGCTCGGGGTGCCAGCGAGATCAAGGAGCACGGGTTCTTCAAAGGGGTCCGGTGGGACCTACTAACAGAGGTAGTACGGCCGCCGTTTATTCCGTCGAGAGAGAACGGGGACTGGACGGGGCTGGCGGGCGCCGGCGGGGCGGACATAGGGGAATACTTGGAGAGATTAAGATCGCGGTCACCGGCGAAACGGCGGGATACTTGTTTAACAGAATTCTGA 1194 0.5561 MDSATPPSPELRLDELRALKVLGKGAMGTVFLVNDVVADPSARCPFALKVVEKSSVHNKLDTDRRARWEIHVLSRLTHPFLPSLLGTFENHQFLAWAIPFCPGGDLNVLRYRQTDRVFAPAVIRFYLAEIICALEHLHAQGIAYRDLKPENVLVQQSGHVTLTDFDLSRNLAPKTIKNAITVEQNLSDNRGKHRRNFTRWIPVPQDIIHIKRGLKKAKSARVIPVSRRKASFSNGERSNSFVGTEEYVSPEVVRGEGHGFAVDWWALGILTYEMLYGTTPFKGRNRKETFCNVVTKAPEFAGKRTTLTDLIERLLQKDPTKRLGYARGASEIKEHGFFKGVRWDLLTEVVRPPFIPSRENGDWTGLAGAGGADIGEYLERLRSRSPAKRRDTCLTEF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2701 397 SMART serkin_6 16 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2701 397 FunFam Serine/threonine-protein kinase OXI1 236 357 - -
Prci7g2701 397 Pfam Protein kinase domain 232 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2701 397 Pfam Protein kinase domain 19 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2701 397 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Prci7g2701 397 PANTHER FLIPPASE KINASE 1-RELATED 10 358 - -
Prci7g2701 397 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
Prci7g2701 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Prci7g2701 397 Gene3D Transferase(Phosphotransferase) domain 1 105 175 - -
Prci7g2701 397 SUPERFAMILY Protein kinase-like (PK-like) 13 359 IPR011009 -
Prci7g2701 397 FunFam Serine/threonine-protein kinase OXI1 105 173 - -
Prci7g2701 397 FunFam Serine/threonine-protein kinase UCNL 16 104 - -
Prci7g2701 397 ProSiteProfiles Protein kinase domain profile. 16 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2701 397 Gene3D Transferase(Phosphotransferase) domain 1 233 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2701 Prci-Chr7 38758078 38759622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2701 11 383 AGC Kinase Gene Family AT3G20830 62.169 1.09e-160 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci7g2701 Pkinase 6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2701 - K08286 qsa:O6P43_028132 577.785