Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2698 ATGACCGACCACTACTCCTCCATTGCCTTCTCTTGTTCCTCGCCCTTCAACTTCTCGTCTCTCACTTTACCCTCTCCTCCCAGAGAAGCCCTACCTCTCCTTAACCTGAGCCCCCCAAGACATGATGATGATGATCATATGCAAGTAGACACCCAGGAGAAAGGAGGCATGGGGTTTAGTTCTCTGAAAGATGATCCTTCGAAGCTGGCTTTACAATTACGCCTAGGGCTTCCGACCACTAGTAGTTCCTCGCCTGAGTTGGCTGATTCGAACCTATACTCCGCCGATGCAGTTTCAGACAAAGATGAAGTCACCACTGAATCTTCCAGATATCTCTCTGATAGGATCGCTAGAGGCAGTCAGTATTGGATCCCTTCCCCGGCTCAGATTCTGATTGGTCCGACCCAGTTCTCCTGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATATGAATATAGAAGGGGACCAGAGTCTCTGAGGGGAACACAGCCAACAGCAATGCTGAGGCTTCCGTGCTATTGTTGTGCACCCGGGTGCAAGAACAACATCGAGCATCCCAGAGCCAAACCTCTAAAAGACTTCAGAACCCTTCAAACCCATTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGCGATTGGAGAACTCACGAGAAGAACTGTGGCAGGCTCTGGTATTGCTCTTGCGGCTCTGACTTCAAGCATAAAAGATCTCTTAAAGATCATGTCAAGGCTTTCGGACATGCCCACACTCCTTGTGGCGTTGATCGTCTCCATCAAGATGAAGTAGCTTCTGAAATTGACTGCCCAAACGATTCCTTCCACTCTCATTGA 900 0.4844 MTDHYSSIAFSCSSPFNFSSLTLPSPPREALPLLNLSPPRHDDDDHMQVDTQEKGGMGFSSLKDDPSKLALQLRLGLPTTSSSSPELADSNLYSADAVSDKDEVTTESSRYLSDRIARGSQYWIPSPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGYEYRRGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGRLWYCSCGSDFKHKRSLKDHVKAFGHAHTPCGVDRLHQDEVASEIDCPNDSFHSH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2698 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 164 IPR013087 -
Prci7g2698 299 SUPERFAMILY beta-beta-alpha zinc fingers 203 241 IPR036236 -
Prci7g2698 299 MobiDBLite consensus disorder prediction 29 61 - -
Prci7g2698 299 PANTHER ZINC FINGER PROTEIN WIP2 20 284 IPR043584 GO:0003700|GO:0010468
Prci7g2698 299 Gene3D Classic Zinc Finger 136 159 - -
Prci7g2698 299 ProSitePatterns Zinc finger C2H2 type domain signature. 139 159 IPR013087 -
Prci7g2698 299 FunFam Zinc finger protein WIP2 190 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2698 Prci-Chr7 38712988 38715339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2698 25 290 C2H2 Transcription Factor Family AT1G51220 64.685 9.82e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g2698 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2698 - - qsa:O6P43_000130 415.616