Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2690 ATGAGGAAGTCCGAGCCCCCTGGAAAAAACAAGCAGCTTAGAAAGGGTTTATGGTCACCGGAAGAAGATGACAAGCTCATGAGGTTCATGCGCAACAATGGACAGGGTTGTTGGAGTGATGTGGCCAGAAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGCCTTCGTTGGATCAATTATTTGAGGCCCGATCTTAAACGAGGCGCTTTCTCACCCCAAGAGCAACAACTCGTTATCCATCTGCACTCCCTTCTTGGCAACAGATGGTCTCAGATTGCGGCACACATGCCAGGACGAACAGACAATGAAATCAAGAACTTTTGGAATTCCACGATTAGAAGAAGGCTCAAGAACTCTTTGGCCACAAATGACGTCGCCAATATGGGAGGATTCGTTTCAGCTCAAGATCAACAAAGCATTAACGTACCCATGTTCAACCCTCGTCCCTCACCGCCCACAGCAGACAAGAGTCCTGCGGGAGGAATATTCTCAGCAAGTCGCGGGGTTGAGAAGGTAGATACTGGAACATCAGAATGGGATGAGTTGTTTGTTCCTCCTCTGGAGAGTACTTCTAACCTCAAAGTGGAGAGCACGTGCCACGCACGCTCGGCCAATGCTTACTTTGAAGACGCAAACGGTGGGGTTAATAGCTGCAGAAGCAACAGTAACAGAGGCCACCAGGTGGAGGATTTATTTCAACAAAGTTAA 711 0.4852 MRKSEPPGKNKQLRKGLWSPEEDDKLMRFMRNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEQQLVIHLHSLLGNRWSQIAAHMPGRTDNEIKNFWNSTIRRRLKNSLATNDVANMGGFVSAQDQQSINVPMFNPRPSPPTADKSPAGGIFSASRGVEKVDTGTSEWDELFVPPLESTSNLKVESTCHARSANAYFEDANGGVNSCRSNSNRGHQVEDLFQQS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2690 236 FunFam Myb transcription factor 70 117 - -
Prci7g2690 236 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Prci7g2690 236 CDD SANT 18 62 IPR001005 -
Prci7g2690 236 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Prci7g2690 236 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Prci7g2690 236 Gene3D - 12 68 - -
Prci7g2690 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Prci7g2690 236 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci7g2690 236 CDD SANT 70 110 IPR001005 -
Prci7g2690 236 PANTHER MYB DOMAIN PROTEIN 55 8 139 - -
Prci7g2690 236 SMART sant 67 115 IPR001005 -
Prci7g2690 236 SMART sant 14 64 IPR001005 -
Prci7g2690 236 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Prci7g2690 236 FunFam MYB transcription factor 12 68 - -
Prci7g2690 236 MobiDBLite consensus disorder prediction 215 236 - -
Prci7g2690 236 MobiDBLite consensus disorder prediction 212 236 - -
Prci7g2690 236 Gene3D - 69 129 - -
Prci7g2690 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2690 Prci-Chr7 38662756 38664182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2690 11 189 MYB Transcription Factor Family AT5G12870 52.315 1.90e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g2690 Myb_DNA-binding 5.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2690 K09422 - gmx:100786151 256.914