Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2658 ATGGACACAAGTATGACTCCAATAGTTGGTCTTGAATTTGATGATCTAGAAGAGGCATGGCAATATTGGATTGACTATGGTGGAAGAATAGGATTCAGTGTTAGAAAGCAAAACTCTAATAAGAGCAAGAAGGATGATTCTATCATATATTGCAAATATGTTTGTTCCAAGGAGGGAGTGAAAAAAGCAGATAAAAGAGACTTTAAAACTAAGAAGCCTCGAAAGGAAACAAGAACAGGGTGTGAAGTGAAAATGATAATTAAAAAGGTGAATGAAAGATTTAGAGTTAGTGAACTATTTTTGGACCATAATCACCCTTTAGAGCCCCCAGAGACTATTCATTTATTAGCATCACAAAGGAGATTACCGAAAGCACAAGGCTATGCTTTGGAGTTTGCTGAAGATACGGGGATTAAGCAAAAAGCCTCTTTTAATTTAATGAGCAAATATGTAGGAGGGAGGGCTAATTTGGGGTATACCAAAGAGGAGGTAAAGAGTTATCTAAGATCAAGGAGGCAACGAGACATGATCTATGGTGAAGCTGGGTTTTTACTTCGCTATTTTCAACAACAATTGACAGAAAATCCTTCATTTTTTCATGCTTATCAAATGGACTCAGAAGAGCAGATAACTAATGTGTTTTGGGCTGATGCACGTATGTTGATAGATTATGATTGTTTTGGGGATGTCATTTCATTTGATACAACATACTCTACAAATCGTGACAACAGACCACTTGCCATTTTCTCAGGTTTCAACCATTACAGAGAAGTAGTGATATTTGGTGCTGCTTTATTATATGATGAGACTATTGAGTCTTTTAAATGGCTTTTTGAAACCTTTTTACAAGCACATAAGCAAAAAATGCCATTTACTATGTTTACTGACCAAGATGCAGCAATGGCAAGAGCCTTAGAAGAAATAATGCCAAATGTAAAGCATGGCTTATGCACATTCCACATCAATAGAAATGGGGTGAAACATCTTGGAAACTTAATGAAAGATGGCTCTCGTTTTCTGGGTGAGTTTAATTGGTGCATGTATCATTGCAAGGAAGAAACAAGGTTTGAGGAATCTTGGAAAGAATTATTATCAAAATATAATGTAGAAGAAAATCCATGGTTGATGTCTATTTACAAGTTAAAAGAAAAATGGGCAGCATGTTACATGAAGTACTCAAAGACTCTTGGTATGAGAAGTACACAACTTAGTGAAAGTATCAATTCATTTATAAAAAGTTGCACTAATCCTGAATTGAATATTAGTCAATTCTTCAATGTCTTTGAACAAGTTGTTGTGGATAAGCGGTATAATGAATTGCAAAGTGACTTCAACTCACGCCAGAAGTTGCCAAGGTTGATATTGAAGAGTTCGTCTATGCTGCAACAGCTTTCTCAAGTTTACACACCACCAATTTTTGACTTGTTCCAGCATGAGTATGACTTACGTGATGCTACGTGTATAAAAGAGAGGAAAGAAAGAAAAATAGCTGCAGATGATGATGCTCTTGTTATTGATTATGTAATCACAATGGTTGATAAAAAAGGAGAGTGGAGATTGACATTTGAGCCATCAAGAGAAGATAAAGAGGCTGTCATTACTTGTAATTGTAAGAAGTTTGAACAATGGGGAATACTATGCTGTCATGCATTGAGGATATTGTATGACCAAGATGTAAAGCTACTTCCAAAGCAATATGTGTTAAAGAGGTGGACAAAAGAAGCAAGGTGTGGTGTAGTGCATGATAGTAAGGGAAAGGAAATTGAAGTTGATCCTAAACTAGAATGCTCGAATCGATATAGGCAATTGTGCCCCATGCTCATAAAATTAGCTAGTGATGCATCTGAATGTTCAGAGGCATTCTCTATGGTTCATCAAGCAGTGCTAGAGCTTAGCAAGAAAGTGTCTCAACTTCTTATTAACCACTCATCAGATAGTGTTAATAATGAAGGAGGTGTTGATGATGATGTTGGTAAGAATGATGGTTCAGGCATTGGATTCAAGAAGAGAGAGCGCAAAAAGATTAGTCCAAGTTGGGACACACAAAATATATTAGAAGTGGGTAGATCATCATCTTCGGTACAATATGGCTCCCTTGTGTCAAATATGCCAGTGCAAGTGCAAAATGACCCCCCTGTGTCAAATATGCTGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCATTGTGTCAAATATGCCGGTGCAAGTGCAAACTGGCCCCCTTGTGCCAAGTATGTCGGTGCAAGTGCAAAATGGCCCCCTCGTACCAAGTATGCCTGTGCAAATGCTATATGGTCCTCCCGTGTCAAGTATGCTAGTGCAAGGGCAATATGGCCCCACCGTGTCAAGGATGCCGGTACAAGGGCAATATGGCCCCACCGTGTCAAGGATGCCGGTACAAGGGCAATATAGCCCCCCCGTGTTAGGTATGCTAGTGCAAGGGCAATATGGTCTGCCTGTGCCAAATACACCAATAACAACACAACATGATCCACTTCAAGATTCATTGAACAACAATATGAAGTCACTTGAAGCAATTGAATTTAGTCAAGTATTTGAGAAAGATTCAAATCTGAATGTGAATACAAATCCTCAGTTGTGA 2787 0.3972 MDTSMTPIVGLEFDDLEEAWQYWIDYGGRIGFSVRKQNSNKSKKDDSIIYCKYVCSKEGVKKADKRDFKTKKPRKETRTGCEVKMIIKKVNERFRVSELFLDHNHPLEPPETIHLLASQRRLPKAQGYALEFAEDTGIKQKASFNLMSKYVGGRANLGYTKEEVKSYLRSRRQRDMIYGEAGFLLRYFQQQLTENPSFFHAYQMDSEEQITNVFWADARMLIDYDCFGDVISFDTTYSTNRDNRPLAIFSGFNHYREVVIFGAALLYDETIESFKWLFETFLQAHKQKMPFTMFTDQDAAMARALEEIMPNVKHGLCTFHINRNGVKHLGNLMKDGSRFLGEFNWCMYHCKEETRFEESWKELLSKYNVEENPWLMSIYKLKEKWAACYMKYSKTLGMRSTQLSESINSFIKSCTNPELNISQFFNVFEQVVVDKRYNELQSDFNSRQKLPRLILKSSSMLQQLSQVYTPPIFDLFQHEYDLRDATCIKERKERKIAADDDALVIDYVITMVDKKGEWRLTFEPSREDKEAVITCNCKKFEQWGILCCHALRILYDQDVKLLPKQYVLKRWTKEARCGVVHDSKGKEIEVDPKLECSNRYRQLCPMLIKLASDASECSEAFSMVHQAVLELSKKVSQLLINHSSDSVNNEGGVDDDVGKNDGSGIGFKKRERKKISPSWDTQNILEVGRSSSSVQYGSLVSNMPVQVQNDPPVSNMLVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPIVSNMPVQVQTGPLVPSMSVQVQNGPLVPSMPVQMLYGPPVSSMLVQGQYGPTVSRMPVQGQYGPTVSRMPVQGQYSPPVLGMLVQGQYGLPVPNTPITTQHDPLQDSLNNNMKSLEAIEFSQVFEKDSNLNVNTNPQL 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2658 928 SMART 26again6 533 560 IPR006564 GO:0008270
Prci7g2658 928 Pfam MULE transposase domain 230 324 IPR018289 -
Prci7g2658 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 636 IPR031052 GO:0006355
Prci7g2658 928 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Prci7g2658 928 Pfam SWIM zinc finger 515 555 IPR007527 GO:0008270
Prci7g2658 928 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2658 Prci-Chr7 38510917 38514065 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci7g2658 MULE 4.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2658 - - pcin:129316824 1860.5