Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2657 ATGGATCCAAATTTGCCTGGAACTCATGATTCCATGAACGGACACAAAATAGCTGACGGCACCGTCTTCTCTGATACAAATCAATACCTAAATCCAGGAGATGAGTGGAATCCTGACGAAGATCATCAGACCGTTCTTAATTTCTACCGTGATATTTTTCATCAACCTGATGTGGGCCCCCTTAGTTATGCTCCGCACACGAGCTTGGTTTCTGAAGAAGTGCCGCCGAATCCATCCCAGAGTGCGAGTCCTGTGGAAGGAGTGCCGCATGCCCCTTATTCAGCCGTGACCTCGGCTCCGGATCCTTCTCTAGAAGACTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCATGCATGTTTTATGATCCACTCAGTCTAAAACTTACTGAGAAATCATTCTATGATGCTCTTAGATACAACAACCCTCACTCCCCTAATGAGCACCCTCTCCTTGACTTTGTTGAGAGCCCGGATGGTCATTCCTCTGGAACTACTACTGATTCTAGTACTAGCGGTGGCGGCACCAGCACCAGCACCAACGACTTAGAATTAAGGCCCTCTTCACCAGAGACCTCTGTTTTGGGGGATCATGTTTTCCAGTTCAAATCGCAACCCGTGTCTCAGCAGTCCTCACAATCTCCAAATACTTTAACTAATATTAGTGATGGACTGTTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATCTTTAGTGATGCAGACTCTGTCTCGCAATTCAATAGAGGTTTAGAGGAAGCTAGCAAATTTCTTCCTAGAGGAGCTCAACTCGTCACGGGTCTGGAGAGCACCACAGTTTCTGTACAGTCAAAGGGAGTTGGAGAAAAGGCGACGCTGAATAAAGAGAAAGATGCTAGGGAGAATTTACATGGGTTAAAGGGTAGAAAGAATCATGACCGTGATGGTATTGTTGATGAAGAAGAAGGGAGAAGCAACAAACAGTCAGCAGTGTATGTTGATGAGAGTGAATTATCGGAAATGTTTGACAAAGTGTTGCTTAGCGTTGAGAATGTTCCATTATGTGCTGAGCACGAAAGCTTGCACTCTGGATCAGGGAAAGACGTGCAGCCAAATGATCAGGTTGTGGAACCATCTGATGGAGGGAAGACACGCTCTAAGAAACAAGGGAGCAAGAAGGAAACGGTGGATTTGAGGACACTTTTGGTTTCATGCGCACAAGCCGTGTCTGCCAACGATAGCAGGACTGCTCATGAATTACTAAAACAGATCAGGCAGCATTCTTCTCCCTTCGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCGAATGGCCTTGAGGCACGTTTGGTTGGTGGTGGTGCTGGAACTCAGCTTTTTTATACTTCTCTGAGCTCCAAGAGGATCTCTGCTGCTGATATTTTGAAAGCTTACCAAGTTTCAATATCTGCCTCACCTTTTAAGAAGTTTGCACATTTCTTTGCAATAAAGATGATTTTAAAAGCGGTTGAAAAGGCAGAAACCCTTCATATTATTGATTTTGGGATCCTATATGGCTTTCAGTGGCCAATGCTTATCAAGTTTCTTTCAATTAGAGCTGGTGGACCTCCCAAGCTACGCATCACCGGAATAGAATTTCCCCAACCTGGCTTTCGTCCAGCAGAAAGAATTGAGGAAACCGGTCGTCGTCTTGCTAACTATTGCAGTCGTTTTAATGTTCCCTTTGAGTACAAAGCTATAGCATCACAAAACTGGGAAACCATCCAAATTGAAGACCTTAAGATTGAGAGGAATGAGGTACTTGCTGTGAACTGCTTGGTGAGGTTTAAGAATTTACTGGATGAGACAATTGAAGTGAAGAGTCCAAGGAATGCAACTCTAAATCTGATAAGGCAGATGAAACCGGATCTTTTTATTCAATCCATTCTTAATGGATCCTACAATGCCCCTTTCTTTGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCTGCATTGTATGATATGTTTGATACTTTGATACCCCGTGAAAATCAATGGAGGTTGATGCTTGAGAAAGAAATTTATGGTCGGGAGGCTATGAACGTTGTGGCATGTGAAGGATTAGAAAGGGTTGAGAGGCCTGAGACATATAAACAATGGCAGGCCAGGGTTACAAGGGCAGGTTTCAAGCAGCTCCCACTGAATAAGGAGCTTATGGCCAAGTTCAGGGAAAAGATGGAGGCATGGTACCATAAAGATTTTGTGTTTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATTTTATATGCGTCAACTTGTTGGGTTCCAGCATAA 2349 0.4406 MDPNLPGTHDSMNGHKIADGTVFSDTNQYLNPGDEWNPDEDHQTVLNFYRDIFHQPDVGPLSYAPHTSLVSEEVPPNPSQSASPVEGVPHAPYSAVTSAPDPSLEDYDFSETIKYMSQVLMEENLEQKPCMFYDPLSLKLTEKSFYDALRYNNPHSPNEHPLLDFVESPDGHSSGTTTDSSTSGGGTSTSTNDLELRPSSPETSVLGDHVFQFKSQPVSQQSSQSPNTLTNISDGLLNLDSSITQLLAQNIFSDADSVSQFNRGLEEASKFLPRGAQLVTGLESTTVSVQSKGVGEKATLNKEKDARENLHGLKGRKNHDRDGIVDEEEGRSNKQSAVYVDESELSEMFDKVLLSVENVPLCAEHESLHSGSGKDVQPNDQVVEPSDGGKTRSKKQGSKKETVDLRTLLVSCAQAVSANDSRTAHELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRISAADILKAYQVSISASPFKKFAHFFAIKMILKAVEKAETLHIIDFGILYGFQWPMLIKFLSIRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCSRFNVPFEYKAIASQNWETIQIEDLKIERNEVLAVNCLVRFKNLLDETIEVKSPRNATLNLIRQMKPDLFIQSILNGSYNAPFFVTRFREALFHFSALYDMFDTLIPRENQWRLMLEKEIYGREAMNVVACEGLERVERPETYKQWQARVTRAGFKQLPLNKELMAKFREKMEAWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2657 782 ProSiteProfiles GRAS family profile. 396 780 IPR005202 -
Prci7g2657 782 MobiDBLite consensus disorder prediction 304 337 - -
Prci7g2657 782 MobiDBLite consensus disorder prediction 1 38 - -
Prci7g2657 782 MobiDBLite consensus disorder prediction 170 202 - -
Prci7g2657 782 MobiDBLite consensus disorder prediction 366 400 - -
Prci7g2657 782 MobiDBLite consensus disorder prediction 157 202 - -
Prci7g2657 782 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 335 775 IPR005202 -
Prci7g2657 782 MobiDBLite consensus disorder prediction 304 335 - -
Prci7g2657 782 MobiDBLite consensus disorder prediction 68 103 - -
Prci7g2657 782 Pfam GRAS domain family 405 779 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2657 Prci-Chr7 38504102 38507041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2657 112 782 GRAS Transcription Factor Family AT1G07530 52.933 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g2657 GRAS 2.5e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2657 - - pcin:129314564 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2657 7 38504102 38507041 Prci6g0244 6 1419425 1423017 CCT
Prci6g0243 6 1401475 1403842 Prci7g2657 7 38504102 38507041 CCT