Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2650 ATGAAGTGCTTCCATTTCTCAAACGGAGGAGGAGATCCCCGTGAAGACGATGACTCTGTTATCTCCAAGGCTTCCAAGCTCTCCTGGGCACGCTCTCTCAGTGTTGCTTCTTCTACCTTGGGCTCTAGAAGGTCTGAATTTGATTCTGATTCCAAGGACTTCTCTGATGCCGTAGAGTTCCATAAATTCTTGTCTCGGAGGCGAGCTAATGATTTGCGCGTGTTTTCCTTCTCCGAGCTTAAATTGGCAACTCGTGGGTTCAGCAGAGCTCTTTTGATCGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTGTCAGGGTACCCGGCGCGCATGCAAATGACGGTTCACTTTCCGATATGGATGTTGCGATCAAGCAATTGAACCGTAATGGACACCAGGGGCACAGGGAATGGATCAATGAAGTAAACTTGTTGGGTGTAATCAAGCATCCAAATCTCGTGAAGTTACTGGGATATTGCGCTGAAGATGATGAAAGGGGGATTCAGCGGCTTCTAGTTTATGAGCTTATGTTGAATAAGAGCTTGGAAGATCATCTTTTGGGTCGAGTGCCATCAACACTCACATGGATAGCAAGATTAAAAATTGCTCAAGATGCAGCCCGTGGATTGGCATATCTGCATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTCAAGACATCCAACGTCCTGCTGGATGTGGACTTCAATGCAAAGCTTTCTGATTTTGGACTTGCTAGGCAAGGACCCGCAGAAGGATTTGGCCACGTTTCAACATCTGTTGTGGGAACTATTGGTTATGCTGCACCGGAGTATGTTCATACTGGTAAGTTAACTGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTATGAACTCATCACCGGGAGACGAGCTGTCGAGAGAAACCTCCCAAGAAACGAACAAAAGCTCTTGGAATGGGTAAGACATTATGTTTCTGACCCTAGAAAGTTCCATCTTCTGGTAGACCCACGACTTGAAGGACAATATTGCATTAAATCAGCTCAAAAACTTGCAACCCTAGCAAACAAGTGTCTTATGAAGCACCCGAAGTCCCGTCCTAAAATGAGTGAGGTGGTTGAGATGCTTGGATGCATAATTAACGATGCAATTTCTCAGTTTGAATGCACTCTTCAAGCTGTTGTGAGTGAAGAAGAAAAAGAAGAGAAGTTAACTGAAGAGGACGCTGAATCTGGGGCGGCTAAACAAGGGAATAATTATCTGAAGAAGGTCTTGGACTTCAGAGAAATGATGAGCTTAAGAAACAAGTCTATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGGTTAGTACGAACTTGGTGA 1356 0.4469 MKCFHFSNGGGDPREDDDSVISKASKLSWARSLSVASSTLGSRRSEFDSDSKDFSDAVEFHKFLSRRRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVVRVPGAHANDGSLSDMDVAIKQLNRNGHQGHREWINEVNLLGVIKHPNLVKLLGYCAEDDERGIQRLLVYELMLNKSLEDHLLGRVPSTLTWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDVDFNAKLSDFGLARQGPAEGFGHVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRHYVSDPRKFHLLVDPRLEGQYCIKSAQKLATLANKCLMKHPKSRPKMSEVVEMLGCIINDAISQFECTLQAVVSEEEKEEKLTEEDAESGAAKQGNNYLKKVLDFREMMSLRNKSIRRLDWKNWAPGLVRTW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2650 451 Gene3D Transferase(Phosphotransferase) domain 1 178 398 - -
Prci7g2650 451 Pfam Protein tyrosine and serine/threonine kinase 93 373 IPR001245 GO:0004672|GO:0006468
Prci7g2650 451 CDD STKc_IRAK 93 373 - -
Prci7g2650 451 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Prci7g2650 451 FunFam Serine/threonine-protein kinase BIK1 56 177 - -
Prci7g2650 451 ProSiteProfiles Protein kinase domain profile. 87 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2650 451 PANTHER OS01G0588500 PROTEIN-RELATED 52 375 - -
Prci7g2650 451 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Prci7g2650 451 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
Prci7g2650 451 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2650 Prci-Chr7 38436986 38439961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2650 73 374 Glycoside Hydrolase AT3G07070 50.329 2.60e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci7g2650 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2650 - - qsa:O6P43_000204 704.516