Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2648 ATGGGTGGTTGTTTGAGCGCGCAAATTAAAGCAGAAAGCCCATGCAACTCAGGGTTAAATTCAAAGTACGCGAGCACTGACGGAAAGGATGCTAACAGCACAGGGAGCAAGGCGTCGGCAGTGTCAGTTCCTCAGACTCCAAGGAGCGAGGGAGAGATCTTGCAGTCATCCAATTTAAAAAGCTTCACTTTAGCAGAAATGAAGACGGCCACCAGAAATTTCCGTACTGATAGCGTGTTAGGAGAAGGTGGCTTTGGATCGGTGTACAAAGGATGGATCGATGAGCACTCTTTGATTCCTGCCAAACCCGGGACTGGCATGGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTCCAAGGTCACAAGGAGTGGTTGGCCGAAGTGAACTACCTTGGACAGCTCTGTCATCCTCATCTCGTGAAATTGATTGGTTATTGCCTGGAAGATGAACACCGTCTTTTGGCCTACGAATTCATGCCTCGTGGCAGCCTGGAGAATCATTTGTTCAGAAGAGGTTCATATTTTCAACCTCTCTCTTGGAGCCTCCGGATGAAAGTTGCCCTCGGTGCTGCCAGAGGGCTTGCATTTCTCCACAGCGGCGGCATAAAAGTGATATACCGGGATTTCAAGACTTCAAATGTCTTGCTGGATTCCAAATATAATGCAAAACTTTCTGATTTTGGGCTGGCAAGAGATGGACCAACCGGCGACAAGAGTCACGTCTCCACCAGGGTCATGGGAACCTATGGATACGCAGCTCCTGAATATCTAGCCACAGGCCACCTAACAGCCAAGAGCGACGTGTACAGTTTTGGAGTTGTACTGCTGGAGATGCTATCGGGGCGGCGAGCCGTGGATAAGAACAGGCCATCTGGTCAGCACAATTTGGTGGAATGGGCTAAGCCCTGTTTGGCAAACAAACGAAAGATCTTTCGCATCATGGACAGTCGTCTGGAGGGCGAGTACTCGATCGATGAGGCTCACAAGACAGCAATGCTGGCTCTGCGATGCCTCTCCAGCGAGCCCAAGATCAGGCCTACCATGGATGAGGTTGTCAAAGCTTTGGAGCAGCTCCAAGTCTGCGTTCGTGAAAATGGAAGCCACCGCAACTCTCGGCCTCGTATTCGGAGAAGAAGCGCCGATGACTTTAAAGGCAGGAGGGCTTATCCCAGGCCATCTGCTTCTCCTCTCTATGCTTGA 1203 0.5012 MGGCLSAQIKAESPCNSGLNSKYASTDGKDANSTGSKASAVSVPQTPRSEGEILQSSNLKSFTLAEMKTATRNFRTDSVLGEGGFGSVYKGWIDEHSLIPAKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLCHPHLVKLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAARGLAFLHSGGIKVIYRDFKTSNVLLDSKYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKPCLANKRKIFRIMDSRLEGEYSIDEAHKTAMLALRCLSSEPKIRPTMDEVVKALEQLQVCVRENGSHRNSRPRIRRRSADDFKGRRAYPRPSASPLYA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2648 400 Gene3D Transferase(Phosphotransferase) domain 1 160 379 - -
Prci7g2648 400 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2648 400 Pfam Protein kinase domain 75 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2648 400 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Prci7g2648 400 PANTHER OS01G0588500 PROTEIN-RELATED 39 360 - -
Prci7g2648 400 CDD STKc_IRAK 80 359 - -
Prci7g2648 400 MobiDBLite consensus disorder prediction 13 52 - -
Prci7g2648 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci7g2648 400 MobiDBLite consensus disorder prediction 367 400 - -
Prci7g2648 400 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Prci7g2648 400 SUPERFAMILY Protein kinase-like (PK-like) 47 356 IPR011009 -
Prci7g2648 400 FunFam Probable serine/threonine-protein kinase PBL8 160 375 - -
Prci7g2648 400 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2648 Prci-Chr7 38433441 38436179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2648 28 356 Glycoside Hydrolase AT3G07070 47.892 1.99e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci7g2648 Pkinase 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2648 - - pop:7481536 648.662