Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2578 ATGGGTTGCTTTTGTTTCTTAAAGAAATCAAGCAGAAAATCGCAGGCTAACAACTATAGCCAGAGCGCAAAGCCGAACAATCACACAGATACGGTGACAGTTGATTTGAATGTGAATGGGACCAAGGAAGCTCATTCTAAGGATGATCAACTTTCTCTGGACGCGAAGAGATTGAATTTAACGGAAAATGGAGACACCACTGGTAGCACGGCGCAGACTTTTACTTTTGATGAACTTGCAGCAGCAACAGGAAATTTTAGGTCAGACTGCTTTTTGGGAGAAGGAGGATTTGGCAAGGTTTACAAGGGGCATTTGGAGAGGATAAACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAATTCGGGAATTTGTAGTTGAAGTGTTGACACTTGGTCAAGCAGACCACCCTAATCTTGTGAAATTAATTGGGTTTTGTGCTGATGGAGATCAAAGACTATTGGTCTATGAGTACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCGCCCGGTAGGAAACCACTTGATTGGAATACAAGAATGAAAATAGCAGCTGGAGCTGCTAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCTGTGATATACCGTGATTTGAAATGCTCAAACATTTTATTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCCTGGCCAAAGTAGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACATATGGGTACTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCTGACATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACAGGCCGGAAAGCCATTGATAATACTAGACTTGCCAAAGAACAAAACCTGGTTGCATGGGCAAGGCCGTTATTCAAAGACCGGAGAAAATTCTCCCAGATGGTAGACCCTTTGCTTGAAGGTGAATATCCTGTGAGGGGTTTGTACCAAGCTCTAGCAATTGCTGCCATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTCATAACCGACGTCGTTACCGCATTAAACTACCTTGCCTCGCAGAGATATGATCCCCAAACTCATCAAGTACAAAGCTCCAAAAGAAGGGATGATGATCAAACACATCTTGTTCGGAACGGTTCTGCCTCTGACAGATCTTCAGACTAA 1203 0.4397 MGCFCFLKKSSRKSQANNYSQSAKPNNHTDTVTVDLNVNGTKEAHSKDDQLSLDAKRLNLTENGDTTGSTAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLGQADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLPPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRLAKEQNLVAWARPLFKDRRKFSQMVDPLLEGEYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPQTHQVQSSKRRDDDQTHLVRNGSASDRSSD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2578 400 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Prci7g2578 400 Pfam Protein kinase domain 91 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2578 400 Gene3D Transferase(Phosphotransferase) domain 1 163 388 - -
Prci7g2578 400 Gene3D Phosphorylase Kinase; domain 1 57 162 - -
Prci7g2578 400 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2578 400 FunFam probable serine/threonine-protein kinase RLCKVII 58 162 - -
Prci7g2578 400 MobiDBLite consensus disorder prediction 374 390 - -
Prci7g2578 400 MobiDBLite consensus disorder prediction 370 400 - -
Prci7g2578 400 PANTHER OS07G0668900 PROTEIN 13 374 - -
Prci7g2578 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Prci7g2578 400 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2578 400 SUPERFAMILY Protein kinase-like (PK-like) 72 377 IPR011009 -
Prci7g2578 400 CDD STKc_IRAK 92 361 - -
Prci7g2578 400 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2578 Prci-Chr7 38110735 38114119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2578 1 365 Glycoside Hydrolase AT3G07070 56.640 1.26e-147 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci7g2578 Pkinase 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2578 - - gmx:100804000 639.802