Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2577 ATGGGTTGCTTTTGTTTCTTAAAGAAATCAAGCAGAAAATCGCAGGCTAACAACTATAGCCAGAGCGCAAAGCCGAACAATCACACAGGTGCTGATACGGTGACAGTTGATTTGAATGTGAATGGGACCAAGGAAGCTCATTCTAAGGATGATCAACTTTCTCTGGACGCGAAGAGATTGAATTTAACGGAAAATGGAGACACCACTGGTAGCACGGCGCAGACTTTTACTTTTGATGAACTTGCAGCAGCAACAGGAAATTTTAGGTCAGACTGCTTTTTGGGAGAAGGAGGATTTGGCAAGGTTTACAAGGGGCATTTGGAGAGGATAAACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAATTCGGGAATTTGTAGTTGAAGTGTTGACACTTGGTCAAGCAGACCACCCTAATCTTGTGAAATTAATTGGGTTTTGTGCTGATGGAGATCAAAGACTATTGGTCTATGAGTACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCGCCCGGTAGGAAACCACTTGATTGGAATACAAGAATGAAAATAGCAGCTGGAGCTGCTAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCTGTGATATACCGTGATTTGAAATGCTCAAACATTTTATTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCCTGGCCAAAGTAGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACATATGGGTACTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCTGACATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACAGGCCGGAAAGCCATTGATAATACTAGACTTGCCAAAGAACAAAACCTGGTTGCATGGGCAAGGCCGTTATTCAAAGACCGGAGAAAATTCTCCCAGATGGTAGACCCTTTGCTTGAAGGTGAATATCCTGTGAGGGGTTTGTACCAAGCTCTAGCAATTGCTGCCATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTCATAACCGACGTCGTTACCGCATTAAACTACCTTGCCTCGCAGAGATATGATCCCCAAACTCATCAAGTACAAAGCTCCAAAAGAAGGGATGATGATCAAACACATCTTGTTCGGAACGGTTCTGCCTCTGACAGATCTTCAGACTAA 1209 0.4409 MGCFCFLKKSSRKSQANNYSQSAKPNNHTGADTVTVDLNVNGTKEAHSKDDQLSLDAKRLNLTENGDTTGSTAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLGQADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLPPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRLAKEQNLVAWARPLFKDRRKFSQMVDPLLEGEYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPQTHQVQSSKRRDDDQTHLVRNGSASDRSSD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2577 402 CDD STKc_IRAK 94 363 - -
Prci7g2577 402 Gene3D Transferase(Phosphotransferase) domain 1 165 390 - -
Prci7g2577 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Prci7g2577 402 MobiDBLite consensus disorder prediction 372 402 - -
Prci7g2577 402 ProSiteProfiles Protein kinase domain profile. 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2577 402 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Prci7g2577 402 SUPERFAMILY Protein kinase-like (PK-like) 74 379 IPR011009 -
Prci7g2577 402 Pfam Protein kinase domain 93 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2577 402 PANTHER OS07G0668900 PROTEIN 13 376 - -
Prci7g2577 402 FunFam Serine/threonine-protein kinase PBS1 165 380 - -
Prci7g2577 402 Gene3D Phosphorylase Kinase; domain 1 59 164 - -
Prci7g2577 402 SMART serkin_6 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2577 402 MobiDBLite consensus disorder prediction 376 392 - -
Prci7g2577 402 FunFam probable serine/threonine-protein kinase RLCKVII 60 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2577 Prci-Chr7 38110734 38114119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2577 1 367 Glycoside Hydrolase AT3G07070 56.604 3.24e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci7g2577 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2577 - - gmx:100804000 644.81