Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2574 ATGTTCGATCTTAATCTGAATGCCGATTCGACTCATACCGCTTGTAACGATGACTTCGTCAGGTTCTCCGACGAGCTAACGGAAGCCTCCGGAAATAAAATGGCGAAATCCGGGACTTCCAATTCCTCTAATGTCTATGCTAATGGGTCCAGCAATGGAGGAGATGAAGACTCCTGCTCCACACGTGGTGGGGACGCCTTCACCTTTAATTTCGAGATCCTTAAGGAGGAAGGCGGTAAAGAAGTCGCGACCAAGGAGCGATTTCTGTTTAGTGAAACAAAAGGAGTGGATGGCGAATCTGCGAATTGGCAGGGTCAGTCTTTCTCTGCCCTTCCGTCGAGAAAGAGCTGGGTGAGTCTTTCCTTTGATCATCAGGGTGGGAACGGAGAGATGAAGATGGTTCAGGTTCAGCAACAATCTCGGCAGCAAGTGAAGAAAAGCAGAAGAGGTCCCAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCACATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGATTTGATACCGCTCAAGCCGCAGCCAGAGCCTACGATCGAGCTGCTATTAAGTTTAGGGGAGTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGATGAGAAATCTCACCAAGGAGGAATTCGTTCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTAACGCTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTTCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCAGCTATCAAATGTAACGGAAGAGAGGCAGTCACCAACTTTGAACTAAGAACATACGAAGGAGAGATGAAGCCTGAGGTCATTACTGAGGGTGGCAGTCACAATCTTGACCTCAATTTGGGCATTGCAACACCGAGCAGTGGCCCGGAAGAGAATAGGAGCCATCAGTCACAATCTATCCCTTACGACATGCATACTGGAAGAAGATCAAGGAAGATCAATATTGATTCCGTCAATGGTGATCCGTCGTTGAAAAGGCCAGTTGATCCAGAGGAGCGTCCTTCTGCGTGGAATGGCATATATCCTAGTTTCTTTCCCGATCAGGAAAGGGTTTATGGAATCAGTACAGATCATTCACAAGGACTGCCTCCATGGGGTTGGCAAACGCTTGGCCAGGTTACTGCGACGTCAGTACCACTGTTCTCTACTGCAGCATCATCAGGATTCTCAATGTCAGCTACCTTTCCTTTGGCTTCCATCTGTCCAACAAAATCTTTGAGTTTGAGCTCAATTCCCTGTAATATCTGTTTCGATCCATCAAGTGCAGCTGGCAGCAACACAAGTCAACATTATTGCCAGATGAAGTCCCCGCACGCCCCCCGCTAG 1479 0.4801 MFDLNLNADSTHTACNDDFVRFSDELTEASGNKMAKSGTSNSSNVYANGSSNGGDEDSCSTRGGDAFTFNFEILKEEGGKEVATKERFLFSETKGVDGESANWQGQSFSALPSRKSWVSLSFDHQGGNGEMKMVQVQQQSRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQMRNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGSHNLDLNLGIATPSSGPEENRSHQSQSIPYDMHTGRRSRKINIDSVNGDPSLKRPVDPEERPSAWNGIYPSFFPDQERVYGISTDHSQGLPPWGWQTLGQVTATSVPLFSTAASSGFSMSATFPLASICPTKSLSLSSIPCNICFDPSSAAGSNTSQHYCQMKSPHAPR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2574 492 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 FunFam AP2-like ethylene-responsive transcription factor 248 308 - -
Prci7g2574 492 MobiDBLite consensus disorder prediction 364 383 - -
Prci7g2574 492 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Prci7g2574 492 Gene3D AP2/ERF domain 248 308 IPR036955 GO:0003700|GO:0006355
Prci7g2574 492 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 MobiDBLite consensus disorder prediction 31 58 - -
Prci7g2574 492 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 CDD AP2 248 306 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 MobiDBLite consensus disorder prediction 138 158 - -
Prci7g2574 492 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Prci7g2574 492 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 357 - -
Prci7g2574 492 SUPERFAMILY DNA-binding domain 248 307 IPR016177 GO:0003677
Prci7g2574 492 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 Pfam AP2 domain 248 298 IPR001471 GO:0003700|GO:0006355
Prci7g2574 492 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Prci7g2574 492 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2574 Prci-Chr7 38058505 38062985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2574 142 355 AP2-EREBP Transcription Factor Family AT4G36920 76.037 2.50e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci7g2574 AP2 2.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2574 K09284 - qsa:O6P43_000276 625.165