Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2573 ATGTTCGATCTTAATCTGAATGCCGATTCGACTCATACCGCTTGTAACGATGACTTCGTCAGGTTCTCCGACGAGCTAACGGAAGCCTCCGGAAATAAAATGGCGAAATCCGGGACTTCCAATTCCTCTAATGTCTATGCTAATGGGTCCAGCAATGGAGGAGATGAAGACTCCTGCTCCACACGTGGTGGGGACGCCTTCACCTTTAATTTCGAGATCCTTAAGGAGGAAGGCGGTAAAGAAGTCGCGACCAAGGAGCGATTTCTGTTTAGTGAAACAAAAGGAGTGGATGGCGAATCTGCGAATTGGCAGGGTCAGTCTTTCTCTGCCCTTCCGTCGAGAAAGAGCTGGGTGAGTCTTTCCTTTGATCATCAGGGTGGGAACGGAGAGATGAAGATGGTTCAGGTTCAGCAACAATCTCGGCAGCAAGTGAAGAAAAGCAGAAGAGGTCCCAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCACATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGATTTGATACCGCTCAAGCCGCAGCCAGAGCCTACGATCGAGCTGCTATTAAGTTTAGGGGAGTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGATGAGAAATCTCACCAAGGAGGAATTCGTTCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTAACGCTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTTCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCAGCTATCAAATGTAACGGAAGAGAGGCAGTCACCAACTTTGAACTAAGAACATACGAAGGAGAGATGAAGCCTGAGGTCATTACTGAGGGTGGCAGTCACAATCTTGACCTCAATTTGGGCATTGCAACACCGAGCAGTGGCCCGGAAGAGAATAGGAGCCATCAGTCACAATCTATCCCTTACGACATGCATACTGGAAGAAGATCAAGGCAGAAGATCAATATTGATTCCGTCAATGGTGATCCGTCGTTGAAAAGGCCAGTTGATCCAGAGGAGCGTCCTTCTGCGTGGAATGGCATATATCCTAGTTTCTTTCCCGATCAGGAAAGGGTTTATGGAATCAGTACAGATCATTCACAAGGACTGCCTCCATGGGGTTGGCAAACGCTTGGCCAGGTTACTGCGACGTCAGTACCACTGTTCTCTACTGCAGCATCATCAGGATTCTCAATGTCAGCTACCTTTCCTTTGGCTTCCATCTGTCCAACAAAATCTTTGAGTTTGAGCTCAATTCCCTGTAATATCTGTTTCGATCCATCAAGTGCAGCTGGCAGCAACACAAGTCAACATTATTGCCAGATGAAGTCCCCGCACGCCCCCCGCTAG 1482 0.4804 MFDLNLNADSTHTACNDDFVRFSDELTEASGNKMAKSGTSNSSNVYANGSSNGGDEDSCSTRGGDAFTFNFEILKEEGGKEVATKERFLFSETKGVDGESANWQGQSFSALPSRKSWVSLSFDHQGGNGEMKMVQVQQQSRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQMRNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGSHNLDLNLGIATPSSGPEENRSHQSQSIPYDMHTGRRSRQKINIDSVNGDPSLKRPVDPEERPSAWNGIYPSFFPDQERVYGISTDHSQGLPPWGWQTLGQVTATSVPLFSTAASSGFSMSATFPLASICPTKSLSLSSIPCNICFDPSSAAGSNTSQHYCQMKSPHAPR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2573 493 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 FunFam AP2-like ethylene-responsive transcription factor 248 308 - -
Prci7g2573 493 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 Pfam AP2 domain 248 298 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 MobiDBLite consensus disorder prediction 335 356 - -
Prci7g2573 493 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Prci7g2573 493 Gene3D AP2/ERF domain 248 308 IPR036955 GO:0003700|GO:0006355
Prci7g2573 493 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 MobiDBLite consensus disorder prediction 31 58 - -
Prci7g2573 493 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 CDD AP2 248 306 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 MobiDBLite consensus disorder prediction 138 158 - -
Prci7g2573 493 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 SUPERFAMILY DNA-binding domain 248 307 IPR016177 GO:0003677
Prci7g2573 493 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 378 - -
Prci7g2573 493 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Prci7g2573 493 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Prci7g2573 493 MobiDBLite consensus disorder prediction 335 359 - -
Prci7g2573 493 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Prci7g2573 493 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2573 Prci-Chr7 38058505 38062994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2573 142 355 AP2-EREBP Transcription Factor Family AT4G36920 76.037 2.29e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci7g2573 AP2 2.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2573 K09284 - qsa:O6P43_000276 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2573 7 38058505 38062994 Prci6g0353 6 2201771 2205539 CCT
Prci7g2573 7 38058505 38062994 Prci7g2573 7 38058505 38062994 ECH