Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2572 ATGTTCGATCTTAATCTGAATGCCGATTCGACTCATACCGCTTGTAACGATGACTTCGTCAGGTTCTCCGACGAGCTAACGGAAGCCTCCGGAAATAAAATGGCGAAATCCGGGACTTCCAATTCCTCTAATGTCTATGCTAATGGGTCCAGCAATGGAGGAGATGAAGACTCCTGCTCCACACGTGGTGGGGACGCCTTCACCTTTAATTTCGAGATCCTTAAGGAGGAAGGCGGTAAAGAAGTCGCGACCAAGGAGCGATTTCTGTTTAGTGAAACAAAAGGAGTGGATGGCGAATCTGCGAATTGGCAGGGTCAGTCTTTCTCTGCCCTTCCGTCGAGAAAGAGCTGGGTGAGTCTTTCCTTTGATCATCAGGGTGGGAACGGAGAGATGAAGATGGTTCAGGTTCAGCAACAATCTCGGCAGCAAGTGAAGAAAAGCAGAAGAGGTCCCAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCACATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGATTTGATACCGCTCAAGCCGCAGCCAGAGCCTACGATCGAGCTGCTATTAAGTTTAGGGGAGTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGATGAGAAATCTCACCAAGGAGGAATTCGTTCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTAACGCTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTTCTTGGCAAAAAGGCTTATGATAAGGCAGCTATCAAATGTAACGGAAGAGAGGCAGTCACCAACTTTGAACTAAGAACATACGAAGGAGAGATGAAGCCTGAGGTCATTACTGAGGGTGGCAGTCACAATCTTGACCTCAATTTGGGCATTGCAACACCGAGCAGTGGCCCGGAAGAGAATAGGAGCCATCAGTCACAATCTATCCCTTACGACATGCATACTGGAAGAAGATCAAGGCAGAAGATCAATATTGATTCCGTCAATGGTGATCCGTCGTTGAAAAGGCCAGTTGATCCAGAGGAGCGTCCTTCTGCGTGGAATGGCATATATCCTAGTTTCTTTCCCGATCAGGAAAGGGTTTATGGAATCAGTACAGATCATTCACAAGGACTGCCTCCATGGGGTTGGCAAACGCTTGGCCAGGTTACTGCGACGTCAGTACCACTGTTCTCTACTGCAGCATCATCAGGATTCTCAATGTCAGCTACCTTTCCTTTGGCTTCCATCTGTCCAACAAAATCTTTGAGTTTGAGCTCAATTCCCTGTAATATCTGTTTCGATCCATCAAGTGCAGCTGGCAGCAACACAAGTCAACATTATTGCCAGATGAAGTCCCCGCACGCCCCCCGCTAG 1437 0.4823 MFDLNLNADSTHTACNDDFVRFSDELTEASGNKMAKSGTSNSSNVYANGSSNGGDEDSCSTRGGDAFTFNFEILKEEGGKEVATKERFLFSETKGVDGESANWQGQSFSALPSRKSWVSLSFDHQGGNGEMKMVQVQQQSRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQMRNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGSHNLDLNLGIATPSSGPEENRSHQSQSIPYDMHTGRRSRQKINIDSVNGDPSLKRPVDPEERPSAWNGIYPSFFPDQERVYGISTDHSQGLPPWGWQTLGQVTATSVPLFSTAASSGFSMSATFPLASICPTKSLSLSSIPCNICFDPSSAAGSNTSQHYCQMKSPHAPR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2572 478 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 363 - -
Prci7g2572 478 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 MobiDBLite consensus disorder prediction 320 369 - -
Prci7g2572 478 CDD AP2 248 291 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Prci7g2572 478 MobiDBLite consensus disorder prediction 31 58 - -
Prci7g2572 478 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Prci7g2572 478 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 SMART rav1_2 249 297 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 MobiDBLite consensus disorder prediction 320 341 - -
Prci7g2572 478 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 MobiDBLite consensus disorder prediction 138 158 - -
Prci7g2572 478 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Prci7g2572 478 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Prci7g2572 478 SUPERFAMILY DNA-binding domain 248 292 IPR016177 GO:0003677
Prci7g2572 478 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2572 Prci-Chr7 38058505 38062995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2572 1 436 AP2-EREBP Transcription Factor Family AT5G60120 44.515 2.95e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci7g2572 AP2 3.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2572 K09284 - qsa:O6P43_000276 590.882