Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2564 ATGGTTACCTGGAAAATGGAACAGTTCATAGATAACATGCCGCCGATGGATCTGATGCGCTCGGAGAAGATGACCTTCGTTCAACTCATCATCCCCGTCGAGTCTGCTCACAGGGCCGTCTCTTATTTGGGCGAACTCGGCCTCTTCCAGTTCCGAGATTTAAATGATGATAAAAGTCCTTTCCAGAGAACATTTGTTAACCAGGTCAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTTATGTCTTCTCCTCATCCTGTTTTGCAACTAGATATTGAGTTGGAGGAACTAGAGTGTCAACTTGCTGAGCATGAACATGAGCTAATTGAACTGAACTCTAACAGTGAGAAACTTCGTCAATCATGTAACGAGCTTCTGGAGTTTAAGATTGTATTGCAGAAGGCATATGGTTTTCTGGCCTCAAATCATAGCAATGAATTTTCAGATGAGAGGGAGCTGGGGGAGAATGTATACTCAAATGATGGCTATGTTGATACAGGATCTGTGCCTGAGCAGGAATTGAAGCCTGGATCATCAAATCAATCTGGTTTAAGATTCATCAGTGGAATGATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGAGCTACAAGAGGCAATATGCTTTTCAATCAGGCTGCAGCTGATGAGCTAATAGAGGATCCTGTTTCAAATGAGATGATAGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTTAAAATCTGTGAGGCATTTGGTGCAAATTGCTACCCTGTCCCTGAAGATATAACTAAGCAAAGACAAATAAGTAGGGAGGTCTCATCACGCCTTTCTGACTTAGAGACAACTTTGGAGGCGGGGATTAGACACCGGAACAAGGCCCTTGCTTCTATAGAGGGTCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGTTGGTGCCCTGTATTTGCAAAAACACAGATTCAGGAGGCATTGCAGCGTGCAACTTTTGATTGCAGCTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAATCTCCACCCACATATTTTAGAACCAACCGTTTTACAAGTGCATACCAGGAAATTGTTGATGCATATGGTGTTGCAAGGTACGAAGAAGCAAATCCTGCAGTTTACACAGTTATTACATTCCCATTTCTTTTTGCGGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGGGCATTGGTTCTTATAGCACGTGAAAGCAGGCTCAGCAAACAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCACTGTTTTCAATCTATTGTGGGTTAATATACAATGAATTCTTCTCTGTTCCTTTTCACATCTTTGGTAAGTCTGCCTATGCATGCCCAGATACTTCGTGCAGGGATGCACGTACTGCTGGCTTAGTCAAATTACGAGATCCATACCCATTTGGTGTGGACCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTTGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCATTATTTTGGCAGCTCAGTGGATAAGAGGTACCAGTTTGTGCCACAGATGATTTTCCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCGTTAAGTGGTGCACCGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTCCTTAGTCCCACTGATAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTGTGTTATTGCTCTTGGCTTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTAAAGAAGCTTCACCATGAGAGATTCCAAGGACGCACTTATGGTATTCTTACTTCCTCTGAGATGGATCTTGAGGAGGAACCAGATTCTGCCAGGCTACATCATGAGGAATTCAATTTCGGTGAGGTCTTCGTTCACCAAATGATCCACTCTATTGAATTTGTTCTAGGTGCAGTTTCAAATACTGCATCGTATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACCGTTTTTTATGAGAAAGTACTACTTCTTGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGACTAGCCGTTTTTGCCTTTGCAACTGCCTTTATTCTTCTCATGATGGAAACCCTTAGTGCTTTTCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGACCCTTTTCCTCTGCCTCGTTAGCAGAGGAAGATGATTGA 2475 0.4255 MVTWKMEQFIDNMPPMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGLFQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSPHPVLQLDIELEELECQLAEHEHELIELNSNSEKLRQSCNELLEFKIVLQKAYGFLASNHSNEFSDERELGENVYSNDGYVDTGSVPEQELKPGSSNQSGLRFISGMICKSKVLRFERMLFRATRGNMLFNQAAADELIEDPVSNEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDITKQRQISREVSSRLSDLETTLEAGIRHRNKALASIEGHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDCSSQVGIIFHPMDAVESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSKQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGKSAYACPDTSCRDARTAGLVKLRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILFGVAQMNLGIILSYFNAHYFGSSVDKRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRTYGILTSSEMDLEEEPDSARLHHEEFNFGEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSSASLAEEDD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2564 824 Coils Coil 98 132 - -
Prci7g2564 824 PANTHER VACUOLAR PROTON ATPASES 18 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Prci7g2564 824 PIRSF ATP6V0A1 14 824 IPR026028 GO:0000220|GO:0046961
Prci7g2564 824 Pfam V-type ATPase 116kDa subunit family 42 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2564 Prci-Chr7 37987322 37996818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2564 6 817 Primary Pumps ATPases(2) AT2G28520 79.018 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2564 K02154 - gmx:100793301 1451.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2564 7 37987322 37996818 Prci6g0362 6 2249420 2257270 CCT
Prci7g2564 7 37987322 37996818 Prci7g2564 7 37987322 37996818 ECH