Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2563 ATGGATTCTTCCCGTGCAAAACATCAGCAAATGTCTAACCCATCACTGGAGAACATGATAGCCTGCTCAAAAGCACAACAAGAGAGGAAGCCGAGACCTCAGCCAGAAGAAGCACTGAAATGCCCGAGATGTGACTCCACCAACACCAAATTCTGTTACTACAACAATTACAGCCTTTCTCAGCCAAGATACTTCTGCAAGTCATGCAGGAGATATTGGACCAAAGGAGGAACATTGAGGAATGTTCCGGTGGGTGGAGGCTGCAGGAAGAACAAGAGGTCTTCGTCATCAAAGAGGGGTCAAGATCAACCACTCACCCACAACAACCCACTTGCTACCATCCCTTCGTTATCTTATGATTCAGATGACCTCACCCTCGCATTAGTTAGGCTGCAAGAGCAATCCTGTACTGCTGGGCAATTGGGTTTTGATGATCATGATCTTTCTATTTTGGGGAATCCCACGAGTTCCCATTTTGATATTCTTGGCAATCCCGCAAATCCTGGCTTTTTAGATGCATTTAGAAGTGGATTCGGGGAAAACCAGCGGAGTAATAATCTGCAGAATCTGTATTGTGGATACGGAAATGGGGGCATGGGAGAGGTGGACAAGGGCAACGAGGAGATGATGCTCCCCTATGATCAAGAAATCAACAATGCACCCACAACGCAAGCTGTGTTGGTCACTACTATGAAGCAAGAAATAATGTGTAATGGCAGGGAACAGAGTGAAAACAATGTGTTGTGGGGTCTCCCATGGCAGCTCAATGGAGCCATAAACATGGGTGGCATGGGTGGGCTCGATTCAGGAAGAGCAAGTTGGAACAATGGTCTCAGTTCATCTTGGCACGGTCTTCTTAATAGTCCCCTAATGTAG 876 0.4669 MDSSRAKHQQMSNPSLENMIACSKAQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRGQDQPLTPXNNPLATIPSLSYDSDDLTLALVRLQEQSCTAGQLGFDDHDLSILGNPTSSHFDILGNPANPGFLDAFRSGFGENQRSNNLQNLYCGYGNGGMGEVDKGNEEMMLPYDQEINNAPTTQAVLVTTMKQEIMCNGREQSENNVLWGLPWQLNGAINMGGMGGLDSGRASWNNGLSSSWHGLLNSPLM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2563 292 MobiDBLite consensus disorder prediction 84 117 - -
Prci7g2563 292 MobiDBLite consensus disorder prediction 1 22 - -
Prci7g2563 292 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Prci7g2563 292 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Prci7g2563 292 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Prci7g2563 292 MobiDBLite consensus disorder prediction 1 39 - -
Prci7g2563 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 182 IPR045174 GO:0003700|GO:0006355
Prci7g2563 292 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2563 Prci-Chr7 37973007 37975630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2563 37 292 C2C2-Dof Transcription Factor Family AT2G28510 42.105 1.53e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci7g2563 zf-Dof 4.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2563 - - tcc:18590106 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2563 7 37973007 37975630 Prci6g0366 6 2292584 2294627 CCT
Prci7g2563 7 37973007 37975630 Prci7g2563 7 37973007 37975630 ECH