Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2554 ATGGAAGGAGAATATCAACTTGGGTCTAGGTTTCCCCCTGGATTCAGGTTCCATCCTTCTGATGAAGAACTCATAGTTCATTATTTACGAAATAAAATCACCTCTCGTCCACTTCCAGCATTGATTATTGCAGAAATTGATCTGTACAAGTACAACCCGTGGGAGTTACACAAAAAGGCATTGTTTGGGGAGGATGAATGGTATTTTTTTAGCCCCAGAGAGCGCAAGTACCCGAATGGATTAAGACCAAACAGAGCAGCAGCTTCAGGATATTGGAAGGCCACTGGTACGGACAGGCCTATACTAAGCTCTTCCGGTTCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTTTTTTACACAGGTCGCCCTCCCAGAGGGGCCAAGACAGACTGGATCATGAGTGAATACAGATTGGTTGATACAATCAGTAAAACTTCCAGGTTCAAAGGTTCCATGCGACTGGATGACTGGATGCTTTGTCGGGTTCGACACAAGGGCTACTCATCGAAGAATTCTGGTGAGAGTCAGGAGCGTCATTGTGGACCAAATTCGCAGACAAACCTCGCAGGGCTCGAGGAATTCTCAAGAAACACGGACATTGAAGCCAACATTGTCACAAATCATCTGTACAAAGACTATCGAATCTTGGCCTCTATTCTTGCTGGCAAACCTGTACTTCCCACGGAGAACATGTCAAGTGTGAGCTTTAAAGGCAGCAAAGGAGACAGCCTCAATTCAGTGTGCAGCTACTTCGACGCCTTGAACACAAAATCTAGTGAGGATAATCAATATGAAAATCTCATTTCTTTCAACGGGGACCTTAACGTTGAGAACAAAATAGATCCTTTTACTGCCAAGGTGTTGACGAGAAGTGGCATGAACTTATGTAGTCGAAATCAGTCTCAAGATGGCATCCTCAAGGGGAGTCCACCACCAGATCCTACCATCAATTTTTAA 957 0.4472 MEGEYQLGSRFPPGFRFHPSDEELIVHYLRNKITSRPLPALIIAEIDLYKYNPWELHKKALFGEDEWYFFSPRERKYPNGLRPNRAAASGYWKATGTDRPILSSSGSKRIGVKKALVFYTGRPPRGAKTDWIMSEYRLVDTISKTSRFKGSMRLDDWMLCRVRHKGYSSKNSGESQERHCGPNSQTNLAGLEEFSRNTDIEANIVTNHLYKDYRILASILAGKPVLPTENMSSVSFKGSKGDSLNSVCSYFDALNTKSSEDNQYENLISFNGDLNVENKIDPFTAKVLTRSGMNLCSRNQSQDGILKGSPPPDPTINF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2554 318 MobiDBLite consensus disorder prediction 299 318 - -
Prci7g2554 318 FunFam NAC domain-containing protein 72-like 20 170 - -
Prci7g2554 318 PANTHER NAC TRANSCRIPTION FACTOR 56 11 214 - -
Prci7g2554 318 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Prci7g2554 318 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Prci7g2554 318 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Prci7g2554 318 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2554 Prci-Chr7 37876073 37878197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2554 9 273 NAC Transcription Factor Family AT1G69490 48.689 2.99e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g2554 NAM 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2554 - - gmx:100817193 431.024