Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2552 ATGATTCCCGTAGAATCCATTTCTGTTGCTTCTGCCCATAACACCTTGGTCGACCCGAGCTCGAACCCTAACCCTAATTCAAATCCTGTCAAGAAAAGGAGGAATCTCCCGGGAACGCCAGATCCGGGCGCGGAAGTGATAGCACTGTCACCCAAGTCTCTCATGGCGACGAACCGTTTCGTATGCGAAATCTGCAACAAGGGCTTCCAGAGAGACCAGAATTTGCAGCTGCACCGCCGCGGGCATAATCTTCCGTGGAAGCTCCGCCAGAGAACCAACAAAGAAGTGAGGAAGAAGGTGTATGTTTGCCCTGAGAAGACTTGCGTGCACCACGACCCCTCCAGAGCCCTCGGAGACCTCACCGGGATTAAAAAACACTACAGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAAAAATGCTCCAAGAAGTATGCGGTTCAGTCCGATTGGAAAGCCCACAGTAAGATTTGTGGAACTAGAGAATATAAATGTGACTGTGGCACCATTTTCTCCAGGAAGGACAGCTTCATAACGCACAGAGCCTTCTGTGATGCCTTGGCCGAAGAAAGTGCGAGAGCAATAACAACAGTACCTTCAACTTTTACTAACTTGAGAAATGATCATTTGATGAGCATGAACCACCAAACACCACGGATAATCCCAGAGATATTTCCAGGGCTTCATCCAGAAATTGGGGGTGCTGAAGGAGCGTTGGGGAATTTTGGTCAGCTCAATCATCACTCAGCGTCGGAAGCAATTTGA 765 0.4928 MIPVESISVASAHNTLVDPSSNPNPNSNPVKKRRNLPGTPDPGAEVIALSPKSLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYVCPEKTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAFCDALAEESARAITTVPSTFTNLRNDHLMSMNHQTPRIIPEIFPGLHPEIGGAEGALGNFGQLNHHSASEAI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2552 254 MobiDBLite consensus disorder prediction 13 33 - -
Prci7g2552 254 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Prci7g2552 254 Gene3D Classic Zinc Finger 56 83 - -
Prci7g2552 254 Gene3D Classic Zinc Finger 93 184 - -
Prci7g2552 254 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 207 IPR031140 -
Prci7g2552 254 SMART c2h2final6 136 156 IPR013087 -
Prci7g2552 254 SMART c2h2final6 101 131 IPR013087 -
Prci7g2552 254 SMART c2h2final6 60 82 IPR013087 -
Prci7g2552 254 MobiDBLite consensus disorder prediction 13 43 - -
Prci7g2552 254 FunFam protein indeterminate-domain 12-like 39 107 - -
Prci7g2552 254 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Prci7g2552 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Prci7g2552 254 Pfam Zinc-finger double-stranded RNA-binding 60 82 IPR022755 -
Prci7g2552 254 FunFam protein indeterminate-domain 5, chloroplastic-like 114 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2552 Prci-Chr7 37866200 37868807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2552 6 194 IDZ Gene Family AT3G50700 81.481 2.83e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g2552 zf-C2H2_jaz 6.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2552 K25870 - gmx:100781896 366.696