Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2546 ATGGCTTCCGCCAAAATGTCGAAAGCAGAAAACGAAAGCGGCAATGGACAAAGCTCAAAAACAGCGACTAAAGCAAGTAAACCTCGAAAAGAGGGCTTGAAGAAGAAGAATAAACTCGGCAATAGCAAGGCGAAGGATAATAAAGCATCAATCTTTCCGTCTCCTACCACCGAGTTCTTAGAAGGAGGTAAAGGTCCTGGAATTGACAACAATGGCACCACAAATGGGCGGGACGGCGGAACGAGACCCAAGAAAGGTAAACGAAAGCAACAAGATGACGATTATAAAGTTGAAGATAAAGAAAACGCAAAAACGAATGGGCTTCCAATGAGTCGTATCAAGAGAATCATGAAGGCAGAAGATCCCGAGTTACGTGTTTCTGAGGAAGCCATCTTTGTCATCGGCAAAGCTACGGTGAAGTTCATTGAAGAATTTACGCGGGAAGCTCATGCTGGTTCAGTTCAGGGTCGAAAGAAATTTCTTGGTTACCAGCACCTGTCTGATGTTGTAAGTAAGCAGAGGAGATACGACTTTCTTTCAGATTATGTTCCTGAGAAACTAAAAGCTGAAGATGCATTAAAAAAGAATGCAAGCGCCAATCGGGAAGAACTGAAAATGTAA 621 0.43 MASAKMSKAENESGNGQSSKTATKASKPRKEGLKKKNKLGNSKAKDNKASIFPSPTTEFLEGGKGPGIDNNGTTNGRDGGTRPKKGKRKQQDDDYKVEDKENAKTNGLPMSRIKRIMKAEDPELRVSEEAIFVIGKATVKFIEEFTREAHAGSVQGRKKFLGYQHLSDVVSKQRRYDFLSDYVPEKLKAEDALKKNASANREELKM 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2546 206 SUPERFAMILY Histone-fold 75 179 IPR009072 GO:0046982
Prci7g2546 206 MobiDBLite consensus disorder prediction 85 105 - -
Prci7g2546 206 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 108 170 IPR003958 -
Prci7g2546 206 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 89 200 - -
Prci7g2546 206 MobiDBLite consensus disorder prediction 1 109 - -
Prci7g2546 206 MobiDBLite consensus disorder prediction 1 23 - -
Prci7g2546 206 Gene3D Histone, subunit A 80 185 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2546 Prci-Chr7 37819985 37822725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2546 75 167 CCAAT-HAP5 Transcription Factor Family AT1G07980 38.710 3.86e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci7g2546 CBFD_NFYB_HMF 1.1e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2546 - K03506 pcin:129316088 381.719