Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2522 ATGAAGGAAGTTGAGAAGAACTTGGATCCGCAACTATGGCACGCGTGCGCCGGAAGTATGGTTCAAATGCCTCCGGTGAACTCCAGAGTCTTTTACTTTCCTCAAGGCCATGCTGAGCACGCTCAGGCCAACCTTAATTTCCCCCCTTCCTTAAGGATTCCACCGCTCATGCTTTGTCGTGTGGTATCTGTGAAATTCTTGGCCGACCCAGAAACTGATGAAGTTTTTGCTAAGATAAGGTTGGTTCCTGCGAGAAATTCCGAGCTCGATTACGATGACGATGGGGTTACGGACTGTAATGGATCGGAGAATTCAGAAAAACCAGCATCTTTTGCCAAGACACTGACCCAATCTGATGCGAACAATGGTGGGGGCTTCTCTGTTCCAAGGTACTGCGCAGAAACTGTCTTCCCACGGCTGGATTACTCTGCCGAACCACCCGTGCAAACCGTGGCTGCCAAGGACGTTCATGGCGAAACTTGGAATTTCAGACATATATACCGGGGAACACCCCGTAGGCACTTACTAACCACCGGGTGGAGCACTTTCGTGAACCAAAAGAAACTTGTTGCGGGGGATTCTATTGTTTTTTTGAGGGCCGAAAACAGCGAACTCTGTGTCGGAATTCGCCGAGCAAAACGTGGTGGTTTTGGCAGCCGGATGCCAACGCTGTCATCCGGATGGCGCGGTGGTGCTGGGAGTGGTGTGGGGCCTTGTGGGGGCTTCTCTTATTTCCTGAGAGAGGAAAACAACTTACTGCCTAATGCTTGTGGGAATTCAAGCCCTGGAAGAGCTAAAGTGAGGCCTGAATCTGTGATGGAAGCTATGACACTGGCTGCAAATGGTCAGGCATTTGAAGTAGTTTATTATCCTCGAACTAGTACTCCAGAATTTTGTATTAAGGCTGCATCTGTGAGGGCTGCAATGAGAACTCAATGGTGTTGTGGCATGAGGTTCAAGATGGCCTTTGAGACTGAGGATTCTTCTAGAATTAGCTGGTTTATGGGGACCATTGCTTCTGTTCAGGTTGTTGATCCTGTGCGTTGGCCCAACTCCCCATGGCGACTTCTTCAGGTTAATTGGGATGAGCCGGATTTGCTGCAGAATGTGAAGTGTGTTAGCCCATGGTTGATAGAATTGGTATCAAACATGCCAGTCATTCATTTCACACCTTTTTCTGCACCAAGGAAGAAGCTGCGGCTTCCACAGCACTCAGGGTTCCCGCTTGGTGGTCAATTCCCAATACCGACATTTTCAGGCAACCCGCTTGGGCCTAGCAGCCCCTCGTGTTGTCTATCTGGTAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGAATATCTCTTTCAGATCTCCACCTTAACAATAAACTGCAGTTGGGGTTGCTTCCAACTAACATCCAACAACTTGATGTACATCCTGGGATGTCCAACGGCAAGATAGCCAACAATGGCGAGAACAGCCAAAACTTGTCTTGCTTGCTGACAATGGGAAATACTTGTAAGAGTTTGGAGAAATCTGATAATGTTAAGAGACACCAGTTTTTGCTTTTTGGTCAACCAATACTCACTGAGCAACAAATTTCTCATAGCTGTTCTAATGATAAGTTGTCTCAGAATGTTACTGAAAAAGATTTGCCAGAGGAAAATAATGACAAAACAAAGTGCAAATTTAGTGATTCACAATGTGGTCTTTCTCAGCAGCTTTCACCTGGAAAATCTTCTAATGTTGAGTATTCTTGGCAACTAGGCTTGGGTAATGGCCATTGCAAGGTTTTCATGGAATCTGAGGATGTGGGGCGGCCCCTTGACCTATCGCGACTTGGTTCTTATGAAGAGCTGTACAGAAGACTGGCCAATATGTTTGGAATTGAAAGATCTACAATGTTGCGCCATGTGCTCTATTATGATGCATCAGGTGCTGTAAAGCGAACTGGACTAGAACCCTTCAGGTATCTTGTGTTGCTTTTTCTCACGCAGTTTCTACTTTCAATCATCATCTTATCTTTTTCACCGAGAACATTAACCTGTCTCTGTCATGAATATCTAGCTTGTATATTTCAGTCATATATTTATTGTGTTTCTGTTTATCTGGGAGCGCCCTGCAGTGACTTCATGAAAACAGCAAAAAAATTGACAATTCTGACCGATTCAGGTAGCAAAGAGTTTTAA 2181 0.4585 MKEVEKNLDPQLWHACAGSMVQMPPVNSRVFYFPQGHAEHAQANLNFPPSLRIPPLMLCRVVSVKFLADPETDEVFAKIRLVPARNSELDYDDDGVTDCNGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETVFPRLDYSAEPPVQTVAAKDVHGETWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENSELCVGIRRAKRGGFGSRMPTLSSGWRGGAGSGVGPCGGFSYFLREENNLLPNACGNSSPGRAKVRPESVMEAMTLAANGQAFEVVYYPRTSTPEFCIKAASVRAAMRTQWCCGMRFKMAFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKCVSPWLIELVSNMPVIHFTPFSAPRKKLRLPQHSGFPLGGQFPIPTFSGNPLGPSSPSCCLSGNAPAGIQGARHAQFGISLSDLHLNNKLQLGLLPTNIQQLDVHPGMSNGKIANNGENSQNLSCLLTMGNTCKSLEKSDNVKRHQFLLFGQPILTEQQISHSCSNDKLSQNVTEKDLPEENNDKTKCKFSDSQCGLSQQLSPGKSSNVEYSWQLGLGNGHCKVFMESEDVGRPLDLSRLGSYEELYRRLANMFGIERSTMLRHVLYYDASGAVKRTGLEPFRYLVLLFLTQFLLSIIILSFSPRTLTCLCHEYLACIFQSYIYCVSVYLGAPCSDFMKTAKKLTILTDSGSKEF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2522 726 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Prci7g2522 726 FunFam Auxin response factor 313 386 - -
Prci7g2522 726 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Prci7g2522 726 SMART B3_2 111 213 IPR003340 GO:0003677
Prci7g2522 726 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Prci7g2522 726 Gene3D - 589 664 - -
Prci7g2522 726 Gene3D - 313 385 - -
Prci7g2522 726 Gene3D - 109 213 IPR015300 -
Prci7g2522 726 FunFam Auxin response factor 109 213 - -
Prci7g2522 726 CDD B3_DNA 110 211 IPR003340 GO:0003677
Prci7g2522 726 MobiDBLite consensus disorder prediction 537 556 - -
Prci7g2522 726 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 663 IPR044835 GO:0003677|GO:0006355|GO:0009725
Prci7g2522 726 SUPERFAMILY DNA-binding pseudobarrel domain 105 212 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2522 Prci-Chr7 37704520 37709016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2522 3 653 B3 DNA Binding Superfamily AT2G28350 58.696 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Prci7g2522 B3 1.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2522 - - pcin:129315672 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2522 7 37704520 37709016 Prci6g0420 6 2733537 2737432 CCT
Prci7g2522 7 37704520 37709016 Prci7g2522 7 37704520 37709016 ECH