Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2521 ATGAAGGAAGTTGAGAAGAACTTGGATCCGCAACTATGGCACGCGTGCGCCGGAAGTATGGTTCAAATGCCTCCGGTGAACTCCAGAGTCTTTTACTTTCCTCAAGGCCATGCTGAGCACGCTCAGGCCAACCTTAATTTCCCCCCTTCCTTAAGGATTCCACCGCTCATGCTTTGTCGTGTGGTATCTGTGAAATTCTTGGCCGACCCAGAAACTGATGAAGTTTTTGCTAAGATAAGGTTGGTTCCTGCGAGAAATTCCGAGCTCGATTACGATGACGATGGGGTTACGGACTGTAATGGATCGGAGAATTCAGAAAAACCAGCATCTTTTGCCAAGACACTGACCCAATCTGATGCGAACAATGGTGGGGGCTTCTCTGTTCCAAGGTACTGCGCAGAAACTGTCTTCCCACGGCTGGATTACTCTGCCGAACCACCCGTGCAAACCGTGGCTGCCAAGGACGTTCATGGCGAAACTTGGAATTTCAGACATATATACCGGGGAACACCCCGTAGGCACTTACTAACCACCGGGTGGAGCACTTTCGTGAACCAAAAGAAACTTGTTGCGGGGGATTCTATTGTTTTTTTGAGGGCCGAAAACAGCGAACTCTGTGTCGGAATTCGCCGAGCAAAACGTGGTGGTTTTGGCAGCCGGATGCCAACGCTGTCATCCGGATGGCGCGGTGGTGCTGGGAGTGGTGTGGGGCCTTGTGGGGGCTTCTCTTATTTCCTGAGAGAGGAAAACAACTTACTGCCTAATGCTTGTGGGAATTCAAGCCCTGGAAGAGCTAAAGTGAGGCCTGAATCTGTGATGGAAGCTATGACACTGGCTGCAAATGGTCAGGCATTTGAAGTAGTTTATTATCCTCGAACTAGTACTCCAGAATTTTGTATTAAGGCTGCATCTGTGAGGGCTGCAATGAGAACTCAATGGTGTTGTGGCATGAGGTTCAAGATGGCCTTTGAGACTGAGGATTCTTCTAGAATTAGCTGGTTTATGGGGACCATTGCTTCTGTTCAGGTTGTTGATCCTGTGCGTTGGCCCAACTCCCCATGGCGACTTCTTCAGGTTAATTGGGATGAGCCGGATTTGCTGCAGAATGTGAAGTGTGTTAGCCCATGGTTGATAGAATTGGTATCAAACATGCCAGTCATTCATTTCACACCTTTTTCTGCACCAAGGAAGAAGCTGCGGCTTCCACAGCACTCAGGGTTCCCGCTTGGTGGTCAATTCCCAATACCGACATTTTCAGGCAACCCGCTTGGGCCTAGCAGCCCCTCGTGTTGTCTATCTGGTAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGAATATCTCTTTCAGATCTCCACCTTAACAATAAACTGCAGTTGGGGTTGCTTCCAACTAACATCCAACAACTTGATGTACATCCTGGGATGTCCAACGGCAAGATAGCCAACAATGGCGAGAACAGCCAAAACTTGTCTTGCTTGCTGACAATGGGAAATACTTGCTTGGGTAATGGCCATTGCAAGGTTTTCATGGAATCTGAGGATGTGGGGCGGCCCCTTGACCTATCGCGACTTGGTTCTTATGAAGAGCTGTACAGAAGACTGGCCAATATGTTTGGAATTGAAAGATCTACAATGTTGCGCCATGTGCTCTATTATGATGCATCAGGTGCTGTAAAGCGAACTGGACTAGAACCCTTCAGGTATCTTGTGTTGCTTTTTCTCACGCAGTTTCTACTTTCAATCATCATCTTATCTTTTTCACCGAGAACATTAACCTGTCTCTGTCATGAATATCTAGCTTGTATATTTCAGTCATATATTTATTGTGTTTCTGTTTATCTGGGAGCGCCCTGCAGTGACTTCATGAAAACAGCAAAAAAATTGACAATTCTGACCGATTCAGGTAGCAAAGAGTTTTAA 1932 0.4726 MKEVEKNLDPQLWHACAGSMVQMPPVNSRVFYFPQGHAEHAQANLNFPPSLRIPPLMLCRVVSVKFLADPETDEVFAKIRLVPARNSELDYDDDGVTDCNGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETVFPRLDYSAEPPVQTVAAKDVHGETWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENSELCVGIRRAKRGGFGSRMPTLSSGWRGGAGSGVGPCGGFSYFLREENNLLPNACGNSSPGRAKVRPESVMEAMTLAANGQAFEVVYYPRTSTPEFCIKAASVRAAMRTQWCCGMRFKMAFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKCVSPWLIELVSNMPVIHFTPFSAPRKKLRLPQHSGFPLGGQFPIPTFSGNPLGPSSPSCCLSGNAPAGIQGARHAQFGISLSDLHLNNKLQLGLLPTNIQQLDVHPGMSNGKIANNGENSQNLSCLLTMGNTCLGNGHCKVFMESEDVGRPLDLSRLGSYEELYRRLANMFGIERSTMLRHVLYYDASGAVKRTGLEPFRYLVLLFLTQFLLSIIILSFSPRTLTCLCHEYLACIFQSYIYCVSVYLGAPCSDFMKTAKKLTILTDSGSKEF 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2521 643 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 580 IPR044835 GO:0003677|GO:0006355|GO:0009725
Prci7g2521 643 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Prci7g2521 643 FunFam Auxin response factor 313 386 - -
Prci7g2521 643 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Prci7g2521 643 Gene3D - 313 385 - -
Prci7g2521 643 Gene3D - 109 213 IPR015300 -
Prci7g2521 643 SUPERFAMILY DNA-binding pseudobarrel domain 105 212 IPR015300 -
Prci7g2521 643 FunFam Auxin response factor 109 213 - -
Prci7g2521 643 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Prci7g2521 643 CDD B3_DNA 110 211 IPR003340 GO:0003677
Prci7g2521 643 Gene3D - 506 581 - -
Prci7g2521 643 SMART B3_2 111 213 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2521 Prci-Chr7 37704511 37709016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2521 505 641 B3 DNA Binding Superfamily AT4G30080 43.066 3.50e-22 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Prci7g2521 B3 1.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2521 - - pcin:129315672 1016.91