Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2520 ATGTCAGAGGACGTTACCAATATGAAGGATCCTTTGTTTTTCGACAAGAGTTTTAGTGGTCTATCGGATGAAATCTTTGATGATGTCATAAAGTTTTTTGATTTCCCGCTGGACGATGTGGAAACTAACATTGCGGAAGAAGAAGATTGGGATGCTCAATTTAAACGCATTGAAGAGCCATCTTTTGATGTATTCTCAGCCTCATCGTCTGAATTCTGCGGTAAAACTGAAAATGACAATTTACACCTCGGAAGGACTTTCTCTTCGCGTAAGGAGATTTACCACGTAAAACAAATGGCGGGGGCTGCTGAGCCTAACGTCTCTCTCAACAGAAAGGGTCAGTCCCAGTTTCGAACCTGCAGCCCAGTCTCTGTATTCGAAAGCACTACATCTTCCTCCTGTGAGAGCTCCAACTTTGATCTACCTGCCATCCCGGGGAAGCGCCCTCGAGGGAGGCGCCGGCGTCTCTCCAGCTTCACGTCCCTATTGCCAATCGCGTTCGCCTCTGCATCACCGGCATTGCAAAAATCTCGAAAGGGAGCTGCGACAGGACAGTTATTAAACGGAGTGAAAAGAAAGCAGAGGAAGAAGGATCTCTGCATTATCTCGGGCGATATCATGATGAACAAATCCTCGTCAGTGGAGTCGGCCACCCCTAGAAAATGCATGCATTGTGAAGCCACGAAGACCCCACAGTGGAGGGAGGGACCTATGGGTCCAAAGACTCTCTGTAATGCATGTGGGGTTCGATACAGGTCAGGCCGCCTCTTCCCTGAATACCGCCCCGCGGCCAGCCCCACTTTCGTACCGTCTCTGCATTCCAACTCTCACAAGAAGGTCATAGAGATGAGAACCTCAGCCCTGCAAGAGGCTGGGGCTTCTATTTTAGGTTTCTCATCGAATTAA 906 0.489 MSEDVTNMKDPLFFDKSFSGLSDEIFDDVIKFFDFPLDDVETNIAEEEDWDAQFKRIEEPSFDVFSASSSEFCGKTENDNLHLGRTFSSRKEIYHVKQMAGAAEPNVSLNRKGQSQFRTCSPVSVFESTTSSSCESSNFDLPAIPGKRPRGRRRRLSSFTSLLPIAFASASPALQKSRKGAATGQLLNGVKRKQRKKDLCIISGDIMMNKSSSVESATPRKCMHCEATKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHKKVIEMRTSALQEAGASILGFSSN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2520 301 Gene3D - 212 290 IPR013088 GO:0006355|GO:0008270
Prci7g2520 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 218 279 - -
Prci7g2520 301 PANTHER GATA TRANSCRIPTION FACTOR 42 289 - -
Prci7g2520 301 SMART GATA_3 216 266 IPR000679 GO:0006355|GO:0043565
Prci7g2520 301 ProSiteProfiles GATA-type zinc finger domain profile. 216 252 IPR000679 GO:0006355|GO:0043565
Prci7g2520 301 ProSitePatterns GATA-type zinc finger domain. 222 247 IPR000679 GO:0006355|GO:0043565
Prci7g2520 301 FunFam GATA transcription factor 212 294 - -
Prci7g2520 301 CDD ZnF_GATA 221 268 IPR000679 GO:0006355|GO:0043565
Prci7g2520 301 Pfam GATA zinc finger 222 255 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2520 Prci-Chr7 37692649 37696341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2520 18 296 C2C2-Gata Transcription Factor Family AT1G08010 36.770 2.12e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci7g2520 GATA 5.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2520 - - gmx:100813303 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2520 7 37692649 37696341 Prci7g2520 7 37692649 37696341 ECH