Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2485 ATGGTGTCGGACGCGAGTAAGAAGAAGGCAGCGCAAAAGAAGGCTGCCGCTGCTGCTAAGAGAGGAGGGAAGGCCGCCGCCGCCGCCTCATCAAAAGGGGCGGCATCGGAGGCTCAGAAGGCTGCCGATAAGCTTGCCAATGGAGTTGGTGAAATCCAGATATCCGATCGTACGTGCACGGGCGTCCTCTGTTCTCATCCTCTTTCGAGGGATATTCGGATAGAGTCTCTATCGGTTACTTTTCATGGACATGATCTCATAGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGCTATGGTCTACTTGGATTGAATGGTTGTGGAAAATCTACTCTCCTTACAGCATTAGGTTGCCGGGAGCTTCCAATTCCTGATCACATGGATATTTATCACCTTACTAGAGAAATTGAAGCTTCTGACATGTCTGCATTGGCAGCTGTTATAAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAGTTTTGGCAGCACAGGAAGATGGAGGTGGTGAAAGTCTTGAACGTGTTTATGAACGGTTGGAAGCTATTGATGCATCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACATGGCCTTGGTTTTAACAAGCAGATGCAAGCAAAGAAGACACGTGATTTTTCTGGTGGTTGGAGAATGAGGATTGCTTTAGCACGAGCTCTATTTATGAACCCAACCATTCTTTTACTTGATGAACCAACTAATCATCTAGATCTGGAAGCATGTGTATGGCTGGAGGAAAATTTGAAGAAGTTTGATCGCATCCTGGTGGTTGTTTCACACTCTCAAGATTTTCTCAATGGCGTCTGCACAAACATCATCCACATGCAAAACAGAAAGCTGAAGCTCTACACTGGTAACTATGATCAATATGTTCAGACACGTGCTGAATTGGAAGAAAACCAGATGAAGCAGTACAAGTGGGAACAGGAGCAGATTGCTTCAATGAAGGAATATATTGCTCGATTTGGGCATGGATCTGCCAAGCTAGCTCGCCAAGCACAGAGTAAAGAGAAAACGCTGGCAAAAATGGAACGAGGTGGACTTACTGAGAAGGTTGTCAAAGACAAAGTTTTGGTATTCCGCTTTGCTGATGTGGGAAAGCTTCCCCCACCTGTGCTTCAGTTTGTCGAGGTGACTTTTGGTTACACCCCAGATAATCTCATCTACAAAAATCTTGACTTTGGGGTGGACTTAGACTCTAGGATTGCGCTTGTTGGGCCCAATGGAGCTGGGAAGAGTACACTGCTGAAGCTAATGACTGGGGATCTGGCTCCTATTGATGGCATGGTTCGACGACATAACCATCTTCGCATAGCACAATTTCACCAGCACTTGGCTGAAAAGCTAGACATGGAACTGTCTGCTCTCCAGTTTATGATCAAAGAGTACCCTGGAAATGAGGAAGAGAAAATGAGGGCAGCTATTGGGAAGTTTGGACTGTCAGGTAAAGCTCAGGTGATGCCTATGAAGAATTTATCAGACGGCCAGAGGAGCAGGGTAATTTTTGCTTGGTTAGCTTGGAGGCAGCCTCACTTGCTGCTTCTGGATGAACCGACTAACCATTTGGATATTGAGACAATTGACTCTTTGGCTGAGGCATTGAATGAATGGGATGGTGGGATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCAGATCAAGCTGTGACCAGATGGGAGGGTGACATTATGGACTTCAAGGAGCATCTAAGGTCAAAGGCAGGTCTATCTGATTGA 1797 0.4569 MVSDASKKKAAQKKAAAAAKRGGKAAAAASSKGAASEAQKAADKLANGVGEIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTALGCRELPIPDHMDIYHLTREIEASDMSALAAVISCDEERLRLEKEAEVLAAQEDGGGESLERVYERLEAIDASTAEKRAAEILHGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFADVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLAPIDGMVRRHNHLRIAQFHQHLAEKLDMELSALQFMIKEYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQAVTRWEGDIMDFKEHLRSKAGLSD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2485 598 CDD ABCF_EF-3 72 289 - -
Prci7g2485 598 Coils Coil 290 310 - -
Prci7g2485 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 312 IPR003439 GO:0005524
Prci7g2485 598 CDD ABCF_EF-3 383 574 - -
Prci7g2485 598 Gene3D - 72 336 IPR027417 -
Prci7g2485 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 383 598 IPR003439 GO:0005524
Prci7g2485 598 FunFam Abc transporter f family member 1 72 336 - -
Prci7g2485 598 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 20 593 - -
Prci7g2485 598 Pfam ABC transporter 283 359 IPR032781 -
Prci7g2485 598 FunFam ATP-binding cassette sub-family F member 3 343 597 - -
Prci7g2485 598 ProSitePatterns ABC transporters family signature. 216 230 IPR017871 GO:0005524|GO:0016887
Prci7g2485 598 Gene3D - 347 596 IPR027417 -
Prci7g2485 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 577 IPR027417 -
Prci7g2485 598 Pfam ABC transporter 90 244 IPR003439 GO:0005524
Prci7g2485 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 316 IPR027417 -
Prci7g2485 598 SMART AAA_5 96 298 IPR003593 GO:0016887
Prci7g2485 598 SMART AAA_5 408 596 IPR003593 GO:0016887
Prci7g2485 598 Pfam ABC transporter 399 530 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2485 Prci-Chr7 37431983 37438008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2485 203 270 Calmodulin-binding Proteins AT2G36910 41.429 9.40e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2485 7 37431983 37438008 Prci7g2485 7 37431983 37438008 ECH